RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
CLRN1-203ENST00000328863 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 A0A1W2PRG6 482 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 MCIDASD6RGH6 385 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 MS4A18H0YCH9 400 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 hCG_2039718K7EN88 272 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 UPK3AO75631 287 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 PRSS23O95084 383 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 WNT11O96014 354 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 RAF1P04049 648 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 FABP3P05413 133 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 CD3EP07766 207 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 HLA-DOBP13765 273 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 CDH2P19022 906 aaPredicted RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 FUT1P19526 365 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 DNASE1P24855 282 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 DAP3P51398 398 aaKnown RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 RPL18Q07020 188 aaKnown RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 KEAP1Q14145 624 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 MS4A18Q3C1V0 323 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 KLHL17Q6TDP4 642 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 RINLQ6ZS11 566 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 LRRC17Q8N6Y2 441 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 OR6N1Q8NGY5 312 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 OR52N5Q8NH56 324 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 LIPHQ8WWY8 451 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 NRGNQ92686 78 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 POP5Q969H6 163 aaKnown RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 BPIFA2Q96DR5 249 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 ULBP2Q9BZM5 246 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 TRIM15Q9C019 465 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 UBTD1Q9HAC8 227 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 MOV10Q9HCE1 1003 aaKnown RBP13.03□□□□□ -0.32
CLRN1-203ENST00000328863 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 TMEM5Q9Y2B1 443 aa13.03□□□□□ -0.32
CLRN1-203ENST00000328863 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SLC35F4A4IF30 521 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 BLOC1S5-TXNDC5H3BN57 136 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 FFAR1O14842 300 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 KLF4O43474 513 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 PDE5AO76074 875 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 UBOX5O94941 541 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SEMG1P04279 462 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 IFNGR1P15260 489 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 ATP6V1B2P21281 511 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 PAX7P23759 505 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 MSX2P35548 267 aaPredicted RBP13.02□□□□□ -0.33
CLRN1-203ENST00000328863 CSNK1A1P48729 337 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SLC9A3P48764 834 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 FOXG1P55316 489 aaPredicted RBP13.02□□□□□ -0.33
CLRN1-203ENST00000328863 BIDP55957 195 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 PRPS1P60891 318 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 UBE2NP61088 152 aaKnown RBP13.02□□□□□ -0.33
CLRN1-203ENST00000328863 VLDLRP98155 873 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SPIBQ01892 262 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 LGALS3BPQ08380 585 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 DGCR6Q14129 220 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 ANKDD1AQ495B1 522 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 CARD17Q5XLA6 110 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 LCN8Q6JVE9 175 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 MBOAT2Q6ZWT7 520 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SLC35D2Q76EJ3 337 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 CDK20Q8IZL9 346 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 OR1K1Q8NGR3 316 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
CLRN1-203ENST00000328863 ASB9Q96DX5 294 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 LRR1Q96L50 414 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 PIP5K1AQ99755 562 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 EMC6Q9BV81 110 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 NMNAT1Q9HAN9 279 aaPredicted RBP13.02□□□□□ -0.33
CLRN1-203ENST00000328863 CRLF2Q9HC73 371 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SLC17A5Q9NRA2 495 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 PLEKHA6Q9Y2H5 1048 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 HIF3AQ9Y2N7 669 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 SLC25A15Q9Y619 301 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 POLQO75417 2590 aa13.02□□□□□ -0.33
CLRN1-203ENST00000328863 LRBAP50851 2863 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 A0A1W2PPR1 153 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 NPIPB13A6NJU9 1138 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 EFCAB9A8MZ26 197 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 NPIPB4C9JG80 1138 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 M0R3G1 203 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 CLOCKO15516 846 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 IGHG1P01857 330 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 NR2C1P13056 603 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
CLRN1-203ENST00000328863 SMIM11AP58511 58 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 PRKCDQ05655 676 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 BSPH1Q075Z2 132 aa13.01□□□□□ -0.33
CLRN1-203ENST00000328863 CAMK2DQ13557 499 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms