RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 APEHP13798 732 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 MAP1BP46821 2468 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 WNT4P56705 351 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 VBP1P61758 197 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 CRMP1Q14194 572 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 WIPI1Q5MNZ9 446 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 C5orf46Q6UWT4 87 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ATP6V1C2Q8NEY4 427 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 BOD1L1Q8NFC6 3051 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 OTULINQ96BN8 352 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 KTI12Q96EK9 354 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 NDEL1Q9GZM8 345 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 TMEM185BQ9H7F4 350 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ZNF71Q9NQZ8 489 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ITPR1Q14643 2758 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 TRAV36DV7A0A075B6V5 113 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 HPNP05981 417 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 LIMS3P0CW19 117 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 LIMS4P0CW20 117 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ADH6P28332 368 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 UGT2B10P36537 528 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 RPL4P36578 427 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 CLK1P49759 484 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 NCS1P62166 190 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 LSM3P62310 102 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 C1QL3Q5VWW1 255 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 PAQR6Q6TCH4 344 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ATCAYQ86WG3 371 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 C10orf53Q8N6V4 93 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 RPL3LQ92901 407 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 DNAJA3Q96EY1 480 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 MOGAT1Q96PD6 335 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ARHGAP9Q9BRR9 750 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 HAO2Q9NYQ3 351 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 TNFRSF10DQ9UBN6 386 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 MRPS18CQ9Y3D5 142 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 IER3IP1Q9Y5U9 82 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 ZNF17P17021 662 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC2A5P22732 501 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 UQCRC1P31930 480 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 ATP6V1E1P36543 226 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 LTBQ06643 244 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 DOC2BQ14184 412 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 SSX1Q16384 188 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 GLYR1Q49A26 553 aaPredicted RBP16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC22A16Q86VW1 577 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 FAM98AQ8NCA5 519 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 OR4F15Q8NGB8 312 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 NDNFQ8TB73 568 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 STK35Q8TDR2 534 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 KISS1RQ969F8 398 aaPredicted RBP16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 TEAD3Q99594 435 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 HCAR1Q9BXC0 346 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 MED20Q9H944 212 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 LHX6Q9UPM6 363 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 B3GNT3Q9Y2A9 372 aa16.85■□□□□ 0.29
EXOSC3-201ENST00000327304 CCDC182A6NF36 153 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 A8MVM7 634 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 IMPA2O14732 288 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 NPIPB7O75200 414 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 APOL3O95236 402 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 MT-ATP6P00846 226 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 OPN1LWP04000 364 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 TUBA1BP68363 451 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 PLEKHN1Q494U1 663 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 LINC00299Q6ZSB3 139 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 TUBA1AQ71U36 451 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 FAM109AQ8N4B1 249 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 LRRC75AQ8NAA5 344 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 OR52E2Q8NGJ4 325 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 OR9Q1Q8NGQ5 310 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 DYNC2LI1Q8TCX1 351 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 TAAR8Q969N4 342 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 PIGQQ9BRB3 760 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 INPP5EQ9NRR6 644 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 LUZP4Q9P127 313 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 H3BML4 177 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 ACOT7O00154 380 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 CLPXO76031 633 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 BGLAPP02818 100 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 HIST1H2ABP04908 130 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 HIST1H1CP16403 213 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 SHC1P29353 583 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 POU4F2Q12837 409 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 SELENBP1Q13228 472 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 KLHL12Q53G59 568 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC6A19Q695T7 634 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 C3orf33Q6P1S2 294 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 GDPGP1Q6ZNW5 385 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 HIST3H2AQ7L7L0 130 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 SHFQ7M4L6 423 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 IGFN1Q86VF2 1251 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 OR52N1Q8NH53 320 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 TBC1D15Q8TC07 691 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 HIST1H2ACQ93077 130 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 ZHX1-C8orf76Q96EF9 292 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 DTNBP1Q96EV8 351 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 SFXN2Q96NB2 322 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 ZNF649Q9BS31 505 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 OR51E2Q9H255 320 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms