RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SH3D21A4FU49 640 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 A6NIZ1 184 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 KDM4EB2RXH2 506 aaPredicted RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC1A7O00341 560 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 TRAF3IP2O43734 574 aaPredicted RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SYNGR4O95473 234 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 FMO3P31513 532 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 CXCR4P61073 352 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 RAP1BP61224 184 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 RAP1AP62834 184 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 CRMP1Q14194 572 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 C3AR1Q16581 482 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 MESTQ5EB52 335 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 RBM48Q5RL73 367 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF362Q5T0B9 420 aaPredicted RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 ARMC4Q5T2S8 1044 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 MEDAGQ5VYS4 303 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 C19orf48Q6RUI8 117 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC35D2Q76EJ3 337 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 CXXC5Q7LFL8 322 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 JAZF1Q86VZ6 243 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 TEX19Q8NA77 164 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC37A3Q8NCC5 494 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SDR9C7Q8NEX9 313 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 OR52E2Q8NGJ4 325 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 OR4K13Q8NH42 304 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 ASB10Q8WXI3 467 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SARAFQ96BY9 339 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 LRR1Q96L50 414 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SF3B5Q9BWJ5 86 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC25A18Q9H1K4 315 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 HINT3Q9NQE9 182 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 DNAJC27Q9NZQ0 273 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 CAMK2AQ9UQM7 478 aa9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 OR14I1A6ND48 311 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 WISP2O76076 250 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 TNFAIP8O95379 198 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 IFNGR1P15260 489 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 PAICSP22234 425 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ACVR2AP27037 513 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 KLRB1Q12918 225 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 C1DQ13901 141 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 KRTCAP3Q53RY4 240 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 FCRLAQ7L513 359 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 HDDC2Q7Z4H3 204 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 GPAT4Q86UL3 456 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 PM20D2Q8IYS1 436 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 GHDCQ8N2G8 530 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 NPEPL1Q8NDH3 523 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 OR9K2Q8NGE7 335 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF582Q96NG8 517 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 SNX18Q96RF0 628 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 KLHL13Q9P2N7 655 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 TNFRSF10DQ9UBN6 386 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 MCTS1Q9ULC4 181 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 MYRFQ9Y2G1 1151 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 PRR23D1E9PI22 279 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 M0R3G1 203 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 XKRYO14609 159 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 CYTIPO60759 359 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ENTPD6O75354 484 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 BCL10O95999 233 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 CCDC159P0C7I6 412 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 PRR23D2P0DMB1 279 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF43P17038 809 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ACVR1BP36896 505 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 CSNK2BP67870 215 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ITGADQ13349 1161 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 MELKQ14680 651 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC17A1Q14916 467 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 SMN1Q16637 294 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 KCTD21Q4G0X4 260 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 AADACL4Q5VUY2 407 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 NXNL2Q5VZ03 156 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 PLBD1Q6P4A8 553 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 LEG1Q6P5S2 330 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 CHMP1BQ7LBR1 199 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 CPOQ8IVL8 374 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 RNF128Q8TEB7 428 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ROBO4Q8WZ75 1007 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 DDOQ99489 341 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 TUBA1CQ9BQE3 449 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 PLCXD1Q9NUJ7 323 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF175Q9Y473 711 aa9.14□□□□□ -0.95
VIPAS39-201ENST00000327028 ATMQ13315 3056 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 A0A1B0GTH9 108 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF716A6NP11 495 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 NPIPA2E9PIF3 369 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 NPIPA3F8WFD2 350 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 CDKN2AP42771 156 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC16A1P53985 500 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 NIPAL3Q6P499 406 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 BCDIN3DQ7Z5W3 292 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 BPIFB6Q8NFQ5 453 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 FAR1Q8WVX9 515 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 ADAD1Q96M93 576 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 NMNAT3Q96T66 252 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms