RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 UQCRC1P31930 480 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 CAPZBP47756 277 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 TOMM34Q15785 309 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-201ENST00000320755 TMEM69Q5SWH9 247 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 UNQ9370/PRO34162Q6UXP9 181 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 LRRC69Q6ZNQ3 347 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 HIST3H2AQ7L7L0 130 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 TMPRSS12Q86WS5 348 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 TMEM151BQ8IW70 566 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 OR8H3Q8N146 312 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 OR6V1Q8N148 313 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 SLC43A2Q8N370 569 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 OR7G1Q8NGA0 311 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 PTPMT1Q8WUK0 201 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-201ENST00000320755 HIST1H2ACQ93077 130 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 C20orf85Q9H1P6 137 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 ZCCHC4Q9H5U6 513 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 SPAG17Q6Q759 2223 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 THADAQ6YHU6 1953 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 A0A1W2PPC4 97 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 C2CD4DB7Z1M9 353 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 GPR171O14626 319 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 ITGA10O75578 1167 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 WISP1O95388 367 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 FBXO45P0C2W1 286 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 TMIGD3P0DMS9 266 aaPredicted RBP15.83■□□□□ 0.13
COL9A1-201ENST00000320755 HSD17B7P56937 341 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 IGLV3-21P80748 117 aaPredicted RBP15.83■□□□□ 0.13
COL9A1-201ENST00000320755 SLC22A10Q63ZE4 541 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 STAC2Q6ZMT1 411 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 BTN2A1Q7KYR7 527 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF676Q8N7Q3 588 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 OR51A4Q8NGJ6 313 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 TAAR8Q969N4 342 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 OR5V1Q9UGF6 321 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 PLCL2Q9UPR0 1127 aa15.83■□□□□ 0.13
COL9A1-201ENST00000320755 H0YC42 278 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 PDCD5O14737 125 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF749O43361 778 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 TACSTD2P09758 323 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 POU3F3P20264 500 aaPredicted RBP15.83■□□□□ 0.12
COL9A1-201ENST00000320755 DPP4P27487 766 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 CCR9P51686 369 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 PLA2G7Q13093 441 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 SKP2Q13309 424 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 HACD4Q5VWC8 232 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 ZSCAN1Q8NBB4 408 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 S100A16Q96FQ6 103 aaKnown RBP15.83■□□□□ 0.12
COL9A1-201ENST00000320755 LRFN5Q96NI6 719 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 HRASLSQ9HDD0 168 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 EIF3KQ9UBQ5 218 aaKnown RBP15.83■□□□□ 0.12
COL9A1-201ENST00000320755 PCNX3Q9H6A9 2034 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 MEN1O00255 615 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 ICOSLGO75144 302 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 AKR7A3O95154 331 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 CLPSP04118 112 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 PNMTP11086 282 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 SDHAP31040 664 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 FOXL2P58012 376 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 ZP2Q05996 745 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 HYAL4Q2M3T9 481 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 CD276Q5ZPR3 534 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 SLC25A25Q6KCM7 469 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 SLC35D2Q76EJ3 337 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 PM20D2Q8IYS1 436 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 NSMAFQ92636 917 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 RNF166Q96A37 237 aaPredicted RBP15.83■□□□□ 0.12
COL9A1-201ENST00000320755 SEMA4CQ9C0C4 833 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 RANBP3Q9H6Z4 567 aaPredicted RBP15.83■□□□□ 0.12
COL9A1-201ENST00000320755 PDE7BQ9NP56 450 aa15.83■□□□□ 0.12
COL9A1-201ENST00000320755 ARPC1BO15143 372 aaKnown RBP15.82■□□□□ 0.12
COL9A1-201ENST00000320755 NOS1APO75052 506 aaPredicted RBP15.82■□□□□ 0.12
COL9A1-201ENST00000320755 IFI6P09912 130 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 ADRA2CP18825 462 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 CDK2P24941 298 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF81P51508 661 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 ALKBH1Q13686 389 aaKnown RBP15.82■□□□□ 0.12
COL9A1-201ENST00000320755 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL9A1-201ENST00000320755 SLC16A9Q7RTY1 509 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 FAM122BQ7Z309 247 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 MARCH3Q86UD3 253 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 OR56B4Q8NH76 319 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 FCAMRQ8WWV6 532 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 TSPAN32Q96QS1 320 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 DPCDQ9BVM2 203 aaPredicted RBP15.82■□□□□ 0.12
COL9A1-201ENST00000320755 METTL17Q9H7H0 456 aaPredicted RBP15.82■□□□□ 0.12
COL9A1-201ENST00000320755 EMC7Q9NPA0 242 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 COPZ2Q9P299 210 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 HIF3AQ9Y2N7 669 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 KRT33AO76009 404 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 DNASE1P24855 282 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 DCTDP32321 178 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 SLC37A1P57057 533 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 MESTQ5EB52 335 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 OR2T35Q8NGX2 323 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 MAP6Q96JE9 813 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 SEC22CQ9BRL7 303 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 SLITRK2Q9H156 845 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 GMEB2Q9UKD1 530 aa15.82■□□□□ 0.12
COL9A1-201ENST00000320755 TRAV8-7A0A075B6U6 113 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms