RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CACNA1IQ9P0X4 2223 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 LRRC72A6NJI9 287 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 FADS1O60427 444 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 ADAM11O75078 769 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 GLSO94925 669 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 RPA2P15927 270 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 SLC6A6P31641 620 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 VASPP50552 380 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 ST8SIA6P61647 398 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 BLOC1S1P78537 153 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 EXOSC7Q15024 291 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 OR7A5Q15622 319 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 MLF2Q15773 248 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 SWI5Q1ZZU3 235 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 EIPR1Q53HC9 387 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 DND1Q8IYX4 353 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 LRRC25Q8N386 305 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 STEAP2Q8NFT2 490 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 THAP6Q8TBB0 222 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 PAQR8Q8TEZ7 354 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 INSM2Q96T92 566 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 BARX1Q9HBU1 254 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 TMEM74BQ9NUR3 256 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 COA4Q9NYJ1 87 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 CTSFQ9UBX1 484 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 NDRG3Q9UGV2 375 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 IKZF2Q9UKS7 526 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 KNL1Q8NG31 2342 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 TMEM72A0PK05 275 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 RFPL4AA6NLU0 287 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 F5H0A9 414 aaPredicted RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 RFPL4AL1F8VTS6 287 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ZNF749O43361 778 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 LDB3O75112 727 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 GP1BAP07359 652 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 RAB40ALP0C0E4 278 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 MGMTP16455 207 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ADCYAP1P18509 176 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 DEFB134Q4QY38 66 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 TCEAL5Q5H9L2 206 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 DCST2Q5T1A1 773 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ARHGAP11AQ6P4F7 1023 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 TMEM71Q6P5X7 295 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 TMPRSS11FQ6ZWK6 438 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 KRT77Q7Z794 578 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 SFTPA1Q8IWL2 248 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 RAB40AQ8WXH6 277 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 RELTQ969Z4 430 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 LMF1Q96S06 567 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 PCBD2Q9H0N5 130 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 SLITRK2Q9H156 845 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 APMAPQ9HDC9 416 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 GTF2A1LQ9UNN4 478 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 GPR34Q9UPC5 381 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 A0A1B0GWA3 101 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 TSPAN11A1L157 253 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 OR5H14A6NHG9 310 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 OR6C76A6NM76 312 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 H7C417 338 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 SULT1C2O00338 296 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ZNF806P0C7X5 589 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 UBBP0CG47 229 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 UBCP0CG48 685 aaKnown RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 NFYBP25208 207 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 CST5P28325 142 aaPredicted RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 RPS27AP62979 156 aaKnown RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 UBA52P62987 128 aaKnown RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 HTRA4P83105 476 aaPredicted RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 POU4F2Q12837 409 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 FAM209BQ5JX69 171 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 OR2L13Q8N349 312 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 OR1J2Q8NGS2 313 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ZNF764Q96H86 408 aaPredicted RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 LINC00615Q96LM1 132 aaPredicted RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 TMEM27Q9HBJ8 222 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 FLRT3Q9NZU0 649 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 NOP16Q9Y3C1 178 aaKnown RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 GXYLT2A0PJZ3 443 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 TO15178 435 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 SULT1B1O43704 296 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 CTNSO60931 367 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 LYPD3O95274 346 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ZNF888P0CJ79 500 aaPredicted RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 ADRB3P13945 408 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 NID1P14543 1247 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 DLSTP36957 453 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 PPIAP62937 165 aaKnown RBP8.82□□□□□ -1
PTPRA-202ENST00000318266 DUSP8Q13202 625 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ARHGAP19Q14CB8 494 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 NKPD1Q17RQ9 610 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 TMEM35AQ53FP2 167 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 ALG10BQ5I7T1 473 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 LY6G6FQ5SQ64 297 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 RPL13AP3Q6NVV1 102 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 H3F3CQ6NXT2 135 aa8.82□□□□□ -1
PTPRA-202ENST00000318266 RNF44Q7L0R7 432 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms