RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 WDR77Q9BQA1 342 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 PLEKHA1Q9HB21 404 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF701Q9NV72 531 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 DHDHQ9UQ10 334 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF443Q9Y2A4 671 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ARID2Q68CP9 1835 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NAP1L6A6NFF2 107 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SURF4O15260 269 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SUSD5O60279 629 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TSPAN15O95858 294 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 RNH1P13489 461 aaKnown RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TIMP2P16035 220 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 GUCA1AP43080 201 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 CBX5P45973 191 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TAS2R20P59543 309 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 HNF4GQ14541 408 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MPEG1Q2M385 716 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZXDCQ2QGD7 858 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM31Q5JXX7 168 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 STEAP1BQ6NZ63 245 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NIPAL3Q6P499 406 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ARHGAP11AQ6P4F7 1023 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MBOAT2Q6ZWT7 520 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 FAM122BQ7Z309 247 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NRROSQ86YC3 692 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 CDH26Q8IXH8 852 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR5T1Q8NG75 326 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR1S2Q8NGQ3 325 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 PHOSPHO2Q8TCD6 241 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 METTL21AQ8WXB1 218 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF707Q96C28 371 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MTHFD2LQ9H903 347 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZMAT5Q9UDW3 170 aaKnown RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 PCDHB10Q9UN67 800 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ANK1P16157 1881 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 A0A087WV62 115 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 URADA6NGE7 173 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 GAPDHSO14556 408 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 CDC42EP2O14613 210 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 F11P03951 625 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 FABP1P07148 127 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 DAOP14920 347 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SLC2A5P22732 501 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 CXCR1P25024 350 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 MAPK3P27361 379 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 RPS27AP62979 156 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 UBA52P62987 128 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SNTB1Q13884 538 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 C14orf28Q4W4Y0 310 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 PLA1AQ53H76 456 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 FAM209BQ5JX69 171 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 CD300LGQ6UXG3 332 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 PARS2Q7L3T8 475 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF248Q8NDW4 579 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 OR4C16Q8NGL9 310 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 IRF7Q92985 503 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 FOXRED1Q96CU9 486 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF514Q96K75 400 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 GPR137Q96N19 417 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SULT4A1Q9BR01 284 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SLC38A1Q9H2H9 487 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 A4GALTQ9NPC4 353 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF629Q9UEG4 869 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 EPHA6Q9UF33 1036 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZFHX2Q9C0A1 2572 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 AIPO00170 330 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 NDUFB2O95178 105 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 NMBP08949 121 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF888P0CJ79 500 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 THEGLP0DJG4 465 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 PVRP15151 417 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 AVPR2P30518 371 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 FGF9P31371 208 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 POU3F4P49335 361 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 METAP1P53582 386 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SNRPNP63162 240 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 BATFQ16520 125 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF542PQ5EBM4 170 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 C1orf94Q6P1W5 598 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM200AQ86VY9 491 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ISOC2Q96AB3 205 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 MOAP1Q96BY2 351 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 MED18Q9BUE0 208 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 PCBD2Q9H0N5 130 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZBP1Q9H171 429 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 GHITMQ9H3K2 345 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 C20orf141Q9NUB4 165 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 LSM2Q9Y333 95 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 A0A0A6YYC8 382 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 GGT3PA6NGU5 568 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 OR5H14A6NHG9 310 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF705GA8MUZ8 300 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 H7C1Q1 480 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 I3L1I5 382 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 CASC3O15234 703 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 HCKP08631 526 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 HIST1H1TP22492 207 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 CAMLGP49069 296 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms