RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 LINC00471Q8N535 108 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 BCORP1Q8N888 145 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ACOT11Q8WXI4 607 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 LRRN3Q9H3W5 708 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FN3KQ9H479 309 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FLRT3Q9NZU0 649 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF223Q9UK11 482 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 COL27A1Q8IZC6 1860 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-201ENST00000317677 G3V3Q6 166 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 H3BN98 237 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 WWP2O00308 870 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 PLATP00750 562 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 FCER2P06734 321 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
CPNE1-201ENST00000317677 CDK5Q00535 292 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 OR1Q1Q15612 314 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF141Q15928 474 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 TRIM61Q5EBN2 209 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 PLA2G2CQ5R387 149 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 ARHGAP40Q5TG30 622 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 SEZ6L2Q6UXD5 910 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 PTCHD4Q6ZW05 846 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 BCDIN3DQ7Z5W3 292 aaKnown RBP11.91□□□□□ -0.5
CPNE1-201ENST00000317677 NRMQ8IXM6 262 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 OR1M1Q8NGA1 313 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 OR6S1Q8NH40 331 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 GNPDA2Q8TDQ7 276 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 SCARB1Q8WTV0 552 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 ADAMTS14Q8WXS8 1223 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 PMM1Q92871 262 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 CCDC74BQ96LY2 380 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 IL4I1Q96RQ9 567 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 MESP1Q9BRJ9 268 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
CPNE1-201ENST00000317677 DNAJB12Q9NXW2 375 aaKnown RBP11.91□□□□□ -0.5
CPNE1-201ENST00000317677 MLXQ9UH92 298 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 GSTK1Q9Y2Q3 226 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 SLC6A5Q9Y345 797 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 HEATR5AQ86XA9 2040 aa11.91□□□□□ -0.5
CPNE1-201ENST00000317677 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 HPGDSO60760 199 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 LPLP06858 475 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 GPR4P46093 362 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 EFNB1P98172 346 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 GINS1Q14691 196 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 NDUFAF6Q330K2 333 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 C22orf42Q6IC83 251 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CD200R1LQ6Q8B3 271 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 MBOAT2Q6ZWT7 520 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 RAB11FIP2Q7L804 512 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 SHFQ7M4L6 423 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 NAXDQ8IW45 347 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF614Q8N883 585 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 OR4C3Q8NH37 302 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 OR6C1Q96RD1 312 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 ATF6BQ99941 703 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 NUDT9Q9BW91 350 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 BCL2L14Q9BZR8 327 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 VN1R1Q9GZP7 353 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 DPAGT1Q9H3H5 408 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CACYBPQ9HB71 228 aaKnown RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 Q9N2J8 555 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 COMMD3Q9UBI1 195 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CLEC2DQ9UHP7 191 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CBLCQ9ULV8 474 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 TRAPPC13A5PLN9 417 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 D6RAR5 112 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CDC42EP2O14613 210 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 PRKYO43930 277 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 ENTPD6O75354 484 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 SMIM6P0DI80 62 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 BTCP35070 178 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 ARHGDIBP52566 201 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CRYZQ08257 329 aaKnown RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 TPBGQ13641 420 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 HFEQ30201 348 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 YOD1Q5VVQ6 348 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 RHBDD2Q6NTF9 364 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 SLC23A3Q6PIS1 610 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 LANCL3Q6ZV70 420 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 RANBP3LQ86VV4 465 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 FTMTQ8N4E7 242 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 IFI44Q8TCB0 444 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 SLC2A12Q8TD20 617 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 TM9SF4Q92544 642 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 CXorf58Q96LI9 332 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF251Q9BRH9 671 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 TMPRSS13Q9BYE2 586 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 OR8D2Q9GZM6 311 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 NXF5Q9H1B4 397 aaKnown RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.5
CPNE1-201ENST00000317677 SF3B6Q9Y3B4 125 aaKnown RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 RPL36Q9Y3U8 105 aaKnown RBP11.9□□□□□ -0.5
CPNE1-201ENST00000317677 SPTBN2O15020 2390 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 TEX13CA0A0J9YWL9 993 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms