RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 Q96M85 177 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 VSTM2LQ96N03 204 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 GPR174Q9BXC1 333 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 MOKQ9UQ07 419 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 TRBV5-7A0A0A0MS05 114 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 OR6C74A6NCV1 312 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 LPLP06858 475 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 CFPP27918 469 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 LSSP48449 732 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 LTBQ06643 244 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 LIPNQ5VXI9 398 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 FAM122CQ6P4D5 195 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 ENPP7Q6UWV6 458 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 ZNF511Q8NB15 262 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 ZBTB44Q8NCP5 570 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 OR4C16Q8NGL9 310 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 AIFM2Q9BRQ8 373 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 TAS2R8Q9NYW2 309 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 PFDN2Q9UHV9 154 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 GLS2Q9UI32 602 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 ARPC5O15511 151 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 SERPINI2O75830 405 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 RBBP9O75884 186 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 ACTR1BP42025 376 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 PSMD4P55036 377 aaKnown RBP17.4■□□□□ 0.38
RTN4-201ENST00000317610 ACTR1AP61163 376 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 MAT1AQ00266 395 aaKnown RBP17.4■□□□□ 0.38
RTN4-201ENST00000317610 C2orf68Q2NKX9 166 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 NDUFAF6Q330K2 333 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 ALKAL2Q6UX46 152 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 TFAP2EQ6VUC0 442 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 FAM122BQ7Z309 247 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 TMPRSS12Q86WS5 348 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 OR5M1Q8NGP8 315 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 OR6N1Q8NGY5 312 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 ST8SIA4Q92187 359 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 C3orf49Q96BT1 292 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 TOE1Q96GM8 510 aaKnown RBP17.4■□□□□ 0.38
RTN4-201ENST00000317610 C12orf4Q9NQ89 552 aa17.4■□□□□ 0.38
RTN4-201ENST00000317610 IGKV1D-42A0A075B6H8 117 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 TMEM72A0PK05 275 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 FAM171A2A8MVW0 826 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 C5orf67F2Z3F1 127 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 TSPAN4O14817 238 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 OR10H2O60403 315 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 RPP14O95059 124 aaKnown RBP17.39■□□□□ 0.38
RTN4-201ENST00000317610 IGF2P01344 180 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 CSF1P09603 554 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 APEHP13798 732 aaKnown RBP17.39■□□□□ 0.38
RTN4-201ENST00000317610 PLA2G7Q13093 441 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 NFATC4Q14934 902 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 MPPED2Q15777 294 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 PCGF3Q3KNV8 242 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 ARSKQ6UWY0 536 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 HSD17B13Q7Z5P4 300 aaPredicted RBP17.39■□□□□ 0.38
RTN4-201ENST00000317610 LRRC75AQ8NAA5 344 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 OR2AK2Q8NG84 335 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 COQ8AQ8NI60 647 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 ARPC5LQ9BPX5 153 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 GINS4Q9BRT9 223 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 GDE1Q9NZC3 331 aa17.39■□□□□ 0.38
RTN4-201ENST00000317610 TBC1D3DA0A087WVF3 549 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 SLC22A23A1A5C7 686 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 TBC1D3LB9A6J9 549 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 ZNF254O75437 659 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 ZNF432O94892 652 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 TBC1D3HP0C7X1 549 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 PVRP15151 417 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 SOX2P48431 317 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 BTN1A1Q13410 526 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 GPR18Q14330 331 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 GK2Q14410 553 aaPredicted RBP17.39■□□□□ 0.37
RTN4-201ENST00000317610 TBC1D3CQ6IPX1 549 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 NPSR1Q6W5P4 371 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 ZNF227Q86WZ6 799 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 CDC20BQ86Y33 519 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 TBC1D3Q8IZP1 549 aaPredicted RBP17.39■□□□□ 0.37
RTN4-201ENST00000317610 EIF4E3Q8N5X7 224 aaKnown RBP17.39■□□□□ 0.37
RTN4-201ENST00000317610 CSNK1A1LQ8N752 337 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 LIPHQ8WWY8 451 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 ASB13Q8WXK3 278 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 ASB12Q8WXK4 309 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 MED11Q9P086 117 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 STEAP1Q9UHE8 339 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 HIF3AQ9Y2N7 669 aa17.39■□□□□ 0.37
RTN4-201ENST00000317610 LINC01553A4QN01 128 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 OR4C45A6NMZ5 311 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 C4orf47A7E2U8 309 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 GRXCR1A8MXD5 290 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 F5H5P2 479 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 AQP8O94778 261 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 ZNF35P13682 527 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 UBXN2BQ14CS0 331 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 OR7E24Q6IFN5 339 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 ANKRD16Q6P6B7 361 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 GSG1LQ6UXU4 331 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 RD3Q7Z3Z2 195 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 RCBTB1Q8NDN9 531 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 BVESQ8NE79 360 aa17.38■□□□□ 0.37
RTN4-201ENST00000317610 ZNF417Q8TAU3 575 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms