RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PDCD1LG2Q9BQ51 273 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 TMPRSS13Q9BYE2 586 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SLC25A18Q9H1K4 315 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SEMA6CQ9H3T2 930 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 TAS2R5Q9NYW4 299 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SLC35A3Q9Y2D2 325 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 PCDH15Q96QU1 1955 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 ASXL3Q9C0F0 2248 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 C19orf67A6NJJ6 358 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 RCBTB2O95199 551 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SIX6O95475 246 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 PPP1R3DO95685 299 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 ARFIP1P53367 373 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 CLDN12P56749 244 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.11e-9■□□□□ 10.2
SCAMP4-201ENST00000316097 CDK5R1Q15078 307 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 ZNF626Q68DY1 528 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 C17orf107Q6ZR85 190 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 ABHD13Q7L211 337 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 FCRLAQ7L513 359 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SLC25A45Q8N413 288 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 FCAMRQ8WWV6 532 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SLC25A38Q96DW6 304 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 PELI1Q96FA3 418 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 OR1F2PQ96R84 312 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SERINC2Q96SA4 455 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 GINS4Q9BRT9 223 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 GPN1Q9HCN4 374 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 NRIP3Q9NQ35 241 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 GPR160Q9UJ42 338 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 FXYD6-FXYD2A0A087WZ82 144 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 TRAPPC13A5PLN9 417 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 FAM221BA6H8Z2 402 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 RDH16O75452 317 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 OR2A4O95047 310 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 APOC3P02656 99 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 SLC2A5P22732 501 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 HTR2AP28223 471 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 DCTDP32321 178 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 TSFMP43897 325 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 FASLGP48023 281 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 RPS11P62280 158 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 ACTC1P68032 377 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 ACTA1P68133 377 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 TNFRSF17Q02223 184 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 KCNAB1Q14722 419 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 HEPHL1Q6MZM0 1159 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 OVCH1Q7RTY7 1134 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 MCATQ8IVS2 390 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 ZNF433Q8N7K0 673 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 ZNF454Q8N9F8 522 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 C19orf47Q8N9M1 422 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 OR4C6Q8NH72 309 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 ZMYND19Q96E35 227 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 OR2A7Q96R45 310 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 FXYD6Q9H0Q3 95 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 EML5Q05BV3 1969 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 IGHV5-51A0A0C4DH38 117 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 AIPO00170 330 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 CDC123O75794 336 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 PIAS2O75928 621 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 GABRA1P14867 456 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 ZNF3P17036 446 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 DHPSP49366 369 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 OR1D5P58170 312 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 AMZ1Q400G9 498 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 USP53Q70EK8 1073 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 RANBP3LQ86VV4 465 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 OR7G2Q8NG99 324 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 TAS2R10Q9NYW0 307 aa15.69■□□□□ 0.1
SCAMP4-201ENST00000316097 A0A0A6YYC8 382 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 TRBV2A0A0J9YWF9 115 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 LMO7DNF2Z398 122 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 I3L1I5 382 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 SIGLEC5O15389 551 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 MTRF1O75570 445 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 KDM4BO94953 1096 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 PLATP00750 562 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 HIST1H2ABP04908 130 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 PPP3CBP16298 524 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 CAPZBP47756 277 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 AFF3P51826 1226 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 SIGLEC14Q08ET2 396 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 ERV3-1Q14264 604 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 MELKQ14680 651 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 ETFDHQ16134 617 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 TRMT12Q53H54 448 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 HIST3H2AQ7L7L0 130 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 UBALD2Q8IYN6 164 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 OR51L1Q8NGJ5 315 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 OR1S1Q8NH92 325 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 FAM174AQ8TBP5 190 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 ST8SIA2Q92186 375 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 HIST1H2ACQ93077 130 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 BPIFA2Q96DR5 249 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 MTHFD2LQ9H903 347 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 NOX4Q9NPH5 578 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 LRIT1Q9P2V4 623 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 SIGLEC7Q9Y286 467 aa15.68■□□□□ 0.1
SCAMP4-201ENST00000316097 SLC22A7Q9Y694 548 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms