RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SERTAD2Q14140 314 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SF3A2Q15428 464 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ESCO2Q56NI9 601 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 EXOSC6Q5RKV6 272 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZBTB37Q5TC79 503 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZCCHC12Q6PEW1 402 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 CXXC5Q7LFL8 322 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SIAH3Q8IW03 269 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 KLHL36Q8N4N3 616 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 FAM98AQ8NCA5 519 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 OR52L1Q8NGH7 329 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 OR5M1Q8NGP8 315 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 MOSPD2Q8NHP6 518 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TRMT10AQ8TBZ6 339 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 GPR119Q8TDV5 335 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 RASD2Q96D21 266 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZMYND19Q96E35 227 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 KTI12Q96EK9 354 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 LCORQ96JN0 433 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 OR11A1Q9GZK7 315 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF768Q9H5H4 540 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM185BQ9H7F4 350 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 FKRPQ9H9S5 495 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 UBQLN4Q9NRR5 601 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TNFRSF10DQ9UBN6 386 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 COPS7AQ9UBW8 275 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF223Q9UK11 482 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 VDAC3Q9Y277 283 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 DSPP15924 2871 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 IGKV3D-11A0A0A0MRZ8 115 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TCRBV16S1A1N1A0A5B0 115 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 G3V3Y1 287 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 KLF4O43474 513 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 HPXP02790 462 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 IGKV3-11P04433 115 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 HLA-DPB1P04440 258 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TACR3P29371 465 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 AQP2P41181 271 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SELENOPP49908 381 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 UBE2MP61081 183 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 IGLV3-21P80748 117 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF117Q03924 483 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SNTA1Q13424 505 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 EBPQ15125 230 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 KLHL26Q53HC5 615 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF322Q6U7Q0 402 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TEX261Q6UWH6 196 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SSX6Q7RTT6 188 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 CEACAM19Q7Z692 300 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 PPP1R3BQ86XI6 285 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 DUSP18Q8NEJ0 188 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 OR6K6Q8NGW6 343 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 FGF11Q92914 225 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ADIPOR1Q96A54 375 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ALG8Q9BVK2 526 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TBL1XR1Q9BZK7 514 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SLC25A18Q9H1K4 315 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ERVMER34-1Q9H9K5 563 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 NANSQ9NR45 359 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 RARRES3Q9UL19 164 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 U3KQ87 197 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 DMXL2Q8TDJ6 3036 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TRDV1A0A1B0GX56 115 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM129A0AVI4 362 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PCP4L1A6NKN8 68 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ELOA3DA6NLF2 546 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 BHLHE40O14503 412 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 CDK2AP1O14519 115 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 RNF13O43567 381 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 SLC43A1O75387 559 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PDGFAP04085 211 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 UBL4AP11441 157 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PAICSP22234 425 aaKnown RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 TALDO1P37837 337 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 OR12D2P58182 307 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 RPS18P62269 152 aaKnown RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ELAVL1Q15717 326 aaKnown RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ST3GAL2Q16842 350 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ELOA3BQ3SY89 546 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM255AQ5JRV8 349 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PRPF38BQ5VTL8 546 aaKnown RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 CD300LDQ6UXZ3 194 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 TRILQ7L0X0 811 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 UXS1Q8NBZ7 420 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF485Q8NCK3 441 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ELOA3Q8NG57 546 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 RHBDD1Q8TEB9 315 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 DAZLQ92904 295 aaKnown RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 DHRS9Q9BPW9 319 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 DUSP23Q9BVJ7 150 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 WWTR1Q9GZV5 400 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 RAB33BQ9H082 229 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 NIPAL2Q9H841 368 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 MCCC2Q9HCC0 563 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PRODH2Q9UF12 536 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 SLC6A5Q9Y345 797 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 AK6Q9Y3D8 172 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms