RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ZCCHC3Q9NUD5 404 aaKnown RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 POT1Q9NUX5 634 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 BAIAP2Q9UQB8 552 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 DYRK1BQ9Y463 629 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 PCDHGA1Q9Y5H4 931 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 IGKV1D-43A0A0B4J1Z2 117 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 TRABD2BA6NFA1 517 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SNRPGP15A8MWD9 76 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 H7C417 338 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 LDOC1O95751 146 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 GP1BAP07359 652 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 HOXB2P14652 356 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MAS1LP35410 378 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ZP4Q12836 540 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 UNC119Q13432 240 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 COL28A1Q2UY09 1125 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 PYHIN1Q6K0P9 492 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 TMEM81Q6P7N7 255 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF813Q6ZN06 617 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 LAPTM4BQ86VI4 370 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ACBD7Q8N6N7 88 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MRPS24Q96EL2 167 aaKnown RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 TNFRSF13CQ96RJ3 184 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ZCCHC2Q9C0B9 1178 aaKnown RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MTFP1Q9UDX5 166 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 KLHL20Q9Y2M5 609 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ATMQ13315 3056 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 LOC101059948A0A1B0GTJ6 334 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 OR1F1O43749 312 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 OR10H3O60404 316 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 PPM1BO75688 479 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 GPR75O95800 540 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 CD79AP11912 226 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SRMP19623 302 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SNTA1Q13424 505 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SPANXN2Q5MJ10 180 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 JMJD6Q6NYC1 403 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 STAC2Q6ZMT1 411 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 DEF8Q6ZN54 512 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 CATSPERDQ86XM0 798 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MS4A15Q8N5U1 240 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 OR9Q1Q8NGQ5 310 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 RHBDD1Q8TEB9 315 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 Q96M85 177 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 WDR77Q9BQA1 342 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SLC17A9Q9BYT1 436 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 PISDQ9UG56 409 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MPTX1A8MV57 137 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 MS4A18H0YCH9 400 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 GKN3PP0CG01 181 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ICAM2P13598 275 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 PAX1P15863 534 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ALOX12P18054 663 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 CD27P26842 260 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 OTX1P32242 354 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 SOX6P35712 828 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 GPR1P46091 355 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 RAB38P57729 211 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF121P58317 390 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 RPS21P63220 83 aaKnown RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 SIRPAP78324 504 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 MS4A18Q3C1V0 323 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 RPL22L1Q6P5R6 122 aaKnown RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 KLHL36Q8N4N3 616 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 LHFPL5Q8TAF8 219 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ATOH1Q92858 354 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 SPATA5L1Q9BVQ7 753 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 KLHL25Q9H0H3 589 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 RABL2AQ9UBK7 228 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 EPHA6Q9UF33 1036 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 KCNN3Q9UGI6 736 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 RABL2BQ9UNT1 228 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 EFCAB7A8K855 629 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF264O43296 627 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 SLC28A2O43868 658 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 OR7A10O76100 309 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 AKR7A3O95154 331 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 KLF8O95600 359 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 CTSSP25774 331 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 SLC6A9P48067 706 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 TMED10P49755 219 aaKnown RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 YOD1Q5VVQ6 348 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 BCORP1Q8N888 145 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 CDRT4Q8N9R6 151 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 HYLS1Q96M11 299 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF436Q9C0F3 470 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 TEX51A0A1B0GUA7 166 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF726A6NNF4 738 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 CTAG2O75638 210 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 IGHG1P01857 330 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ALDOBP05062 364 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 FNTBP49356 437 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 CCR6P51684 374 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 GNG2P59768 71 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 SUPT4H1P63272 117 aaKnown RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ILF3Q12906 894 aaKnown RBP eCLIP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 DDX39BQ13838 428 aaKnown RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 POM121L1PQ3SYA9 428 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 AMZ1Q400G9 498 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms