RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PPM1BO75688 479 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 CXCR1P25024 350 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 IDNKQ5T6J7 187 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 DPY19L2P2Q6ZN68 376 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 CEACAM19Q7Z692 300 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 SNX33Q8WV41 574 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 GHSRQ92847 366 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 PDCD1LG2Q9BQ51 273 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 RNF32Q9H0A6 362 aa11.28□□□□□ -0.6
RNF4-201ENST00000314289 MRTO4Q9UKD2 239 aaKnown RBP11.28□□□□□ -0.6
RNF4-201ENST00000314289 PRR32B1ATL7 298 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 LAMTOR5O43504 91 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 OPN1LWP04000 364 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 GUSBP08236 651 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 ARSBP15848 533 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 FGF9P31371 208 aaPredicted RBP11.27□□□□□ -0.6
RNF4-201ENST00000314289 LAMTOR1Q6IAA8 161 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 APCDD1LQ8NCL9 501 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 AP3S1Q92572 193 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 CNN2Q99439 309 aaKnown RBP11.27□□□□□ -0.6
RNF4-201ENST00000314289 NARFLQ9H6Q4 476 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 ISYNA1Q9NPH2 558 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 SEMA5BQ9P283 1151 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 RARRES3Q9UL19 164 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 VDAC3Q9Y277 283 aa11.27□□□□□ -0.6
RNF4-201ENST00000314289 RPP14O95059 124 aaKnown RBP11.27□□□□□ -0.61
RNF4-201ENST00000314289 PNMTP11086 282 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
RNF4-201ENST00000314289 MAB21L1Q13394 359 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 SLITRK4Q8IW52 837 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 SLC35F2Q8IXU6 374 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 GALNT6Q8NCL4 622 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 CCDC120Q96HB5 630 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 DUSP23Q9BVJ7 150 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 BAIAP2Q9UQB8 552 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 RGS9O75916 674 aaPredicted RBP11.27□□□□□ -0.61
RNF4-201ENST00000314289 RRAS2P62070 204 aaPredicted RBP11.27□□□□□ -0.61
RNF4-201ENST00000314289 BIKQ13323 160 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 TNK1Q13470 666 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 PAPD4Q6PIY7 484 aaKnown RBP11.27□□□□□ -0.61
RNF4-201ENST00000314289 ANKRD37Q7Z713 158 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 JAZF1Q86VZ6 243 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 KMT5CQ86Y97 462 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 IFI44Q8TCB0 444 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 HSD17B8Q92506 261 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 PELI1Q96FA3 418 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 NIPAL2Q9H841 368 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 PRELID1Q9Y255 219 aa11.27□□□□□ -0.61
RNF4-201ENST00000314289 RALGAPA1Q6GYQ0 2036 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 A0A0B4J203 849 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 TRBV11-1A0A0K0K1C0 115 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 A0A1W2PPC1 479 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 MASP2O00187 686 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 PAHP00439 452 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ZNF28P17035 718 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 IL11P20809 199 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ADH7P40394 386 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 INPP5JQ15735 1006 aaPredicted RBP11.26□□□□□ -0.61
RNF4-201ENST00000314289 TCEAL6Q6IPX3 200 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 MAML2Q8IZL2 1156 aaPredicted RBP11.26□□□□□ -0.61
RNF4-201ENST00000314289 ABHD4Q8TB40 342 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 GPR119Q8TDV5 335 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 PCNPQ8WW12 178 aaKnown RBP11.26□□□□□ -0.61
RNF4-201ENST00000314289 TCEAL3Q969E4 200 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ATF6BQ99941 703 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 DHRS9Q9BPW9 319 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ALG12Q9BV10 488 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 LAT2Q9GZY6 243 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 HDHD2Q9H0R4 259 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 SYT4Q9H2B2 425 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 HRH3Q9Y5N1 445 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ALG1L2C9J202 215 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 INMT-MINDY4F8WBC2 141 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ORC5O43913 435 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ASAH2BP0C7U1 165 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 PRKACBP22694 351 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 CENPAP49450 140 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 PRPS1P60891 318 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 PPP3R1P63098 170 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ACY1Q03154 408 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ODF4Q2M2E3 257 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 TRIM61Q5EBN2 209 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ASB18Q6ZVZ8 466 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 CARFQ8N187 725 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 PGLYRP3Q96LB9 341 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 TSPAN32Q96QS1 320 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 MED11Q9P086 117 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 GRHPRQ9UBQ7 328 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 SRPK3Q9UPE1 567 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 SLC6A5Q9Y345 797 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 NPFFR2Q9Y5X5 522 aa11.26□□□□□ -0.61
RNF4-201ENST00000314289 FREM3P0C091 2139 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 A0A1B0GTH9 108 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 TMEM72A0PK05 275 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 LEUTXA8MZ59 168 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 ALOX12BO75342 701 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 SLC25A12O75746 678 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 HIST1H2ABP04908 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms