RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SMARCD3Q6STE5 483 aa19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 ADPRHL1Q8NDY3 354 aa19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 FBLIM1Q8WUP2 373 aa19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 HDAC2Q92769 488 aaKnown RBP19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 TP63Q9H3D4 680 aaPredicted RBP19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 ZNF175Q9Y473 711 aa19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 CDH10Q9Y6N8 788 aa19.97■□□□□ 0.79
CCDC85B-201ENST00000312579 ZNF716A6NP11 495 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 POU3F1Q03052 451 aaPredicted RBP19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 CDK5R2Q13319 367 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 TOP3AQ13472 1001 aaPredicted RBP19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 SLC17A1Q14916 467 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 RBM48Q5RL73 367 aaKnown RBP19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 C6orf141Q5SZD1 244 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 SLX4IPQ5VYV7 408 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 WDFY1Q8IWB7 410 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 GCNT2Q8N0V5 402 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 IQCF1Q8N6M8 205 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 CNIH3Q8TBE1 160 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 CALHM2Q9HA72 323 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 RNF6Q9Y252 685 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 RASD1Q9Y272 281 aa19.96■□□□□ 0.79
CCDC85B-201ENST00000312579 A0A1W2PNV4 684 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 CD8B2A6NJW9 211 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 SMNDC1O75940 238 aaKnown RBP eCLIP19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 NDUFB2O95178 105 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 RPL4P36578 427 aaKnown RBP19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 CTXN1P60606 82 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 ERVK-25P63136 954 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 ZP4Q12836 540 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 ENTHD1Q8IYW4 607 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 OR9K2Q8NGE7 335 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 WNT2BQ93097 391 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 TXNDC15Q96J42 360 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 OXGR1Q96P68 337 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 INIPQ9NRY2 104 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 RASSF1Q9NS23 344 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 TBC1D23Q9NUY8 699 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 IL20Q9NYY1 176 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 ADAM18Q9Y3Q7 739 aa19.95■□□□□ 0.78
CCDC85B-201ENST00000312579 TOXO94900 526 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 RCBTB2O95199 551 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 PPP1R3DO95685 299 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 GNLYP22749 145 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 PRPS1P60891 318 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 GINS1Q14691 196 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 EIF2S3LQ2VIR3 472 aaKnown RBP19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 EEF1A1P5Q5VTE0 462 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 C12orf73Q69YU5 71 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 NHLRC1Q6VVB1 395 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 B3GNT6Q6ZMB0 384 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 TUSC5Q8IXB3 177 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 CLDN22Q8N7P3 220 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 ZNF385AQ96PM9 386 aaKnown RBP19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 TTYH2Q9BSA4 534 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 KATNB1Q9BVA0 655 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 TSSK6Q9BXA6 273 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 RNF122Q9H9V4 155 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 MED29Q9NX70 200 aa19.94■□□□□ 0.78
CCDC85B-201ENST00000312579 TRAF3IP2O43734 574 aaPredicted RBP19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 SMIM18P0DKX4 95 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 GLI4P10075 376 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 IFNGR1P15260 489 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 NTF4P34130 210 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 PTGER4P35408 488 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 SMSP52788 366 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 C1DQ13901 141 aaKnown RBP19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 MELKQ14680 651 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 CASP12Q6UXS9 341 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 CREB3L2Q70SY1 520 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 PXKQ7Z7A4 578 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 UEVLDQ8IX04 471 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 SLC43A2Q8N370 569 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 ZIC4Q8N9L1 334 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 TSPAN14Q8NG11 270 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 OR4Q3Q8NH05 313 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 UBE2FQ969M7 185 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 INTS12Q96CB8 462 aaKnown RBP19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 EMC6Q9BV81 110 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 IFT27Q9BW83 186 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 MRPS26Q9BYN8 205 aaKnown RBP19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 SLC25A19Q9HC21 320 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 BLOC1S6Q9UL45 172 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 MED12LQ86YW9 2145 aa19.93■□□□□ 0.78
CCDC85B-201ENST00000312579 MBD3L4A6NDZ8 208 aaPredicted RBP19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 MBD3L3A6NE82 208 aaPredicted RBP19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 MBD3L5A6NJ08 208 aaPredicted RBP19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 MPZL2O60487 215 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 ZNF43P17038 809 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 CA7P43166 264 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 GIPRP48546 466 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 PMPCAQ10713 525 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 SF3B4Q15427 424 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 ANKDD1AQ495B1 522 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 LAIR2Q6ISS4 152 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 MCEMP1Q8IX19 187 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 GALNT11Q8NCW6 608 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 ANKK1Q8NFD2 765 aa19.92■□□□□ 0.78
CCDC85B-201ENST00000312579 MBD3L2Q8NHZ7 208 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms