RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 OR9Q1Q8NGQ5 310 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OR13F1Q8NGS4 319 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SLC25A43Q8WUT9 341 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ZNRF4Q8WWF5 429 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 NMD3Q96D46 503 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 WBP1Q96G27 269 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 TMEM80Q96HE8 168 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OR5B2Q96R09 309 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 NMNAT3Q96T66 252 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CDCA4Q9BXL8 241 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ASPNQ9BXN1 380 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 NMNAT2Q9BZQ4 307 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CHST11Q9NPF2 352 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 INIPQ9NRY2 104 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ALKBH4Q9NXW9 302 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF346Q9UL40 294 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CSAG2Q9Y5P2 127 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SPIN1Q9Y657 262 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 RELNP78509 3460 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SMIM31A0A1B0GVY4 71 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF99A8MXY4 864 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF814B7Z6K7 855 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 H7C1C5 153 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 KLK10O43240 276 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 IDH3BO43837 385 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 NME2P1O60361 137 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SERPINI2O75830 405 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SEC14L2O76054 403 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 IFNGP01579 166 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SP1P08047 785 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 NME2P22392 152 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 AHCYP23526 432 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 GDF1P27539 372 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 LCN6P62502 163 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 RAB40BQ12829 278 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZP4Q12836 540 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 KRR1Q13601 381 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 MFSD13AQ14CX5 517 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TOMM20Q15388 145 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ACKR1Q16570 336 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 KLHL12Q53G59 568 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 WIPI1Q5MNZ9 446 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 UBE2UQ5VVX9 321 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SLC25A25Q6KCM7 469 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 LEG1Q6P5S2 330 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 H1FNTQ75WM6 255 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 MEPCEQ7L2J0 689 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 GALNTL5Q7Z4T8 443 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 GPR141Q7Z602 305 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 EXD3Q8N9H8 876 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SCAIQ8N9R8 606 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR4F15Q8NGB8 312 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SPATA3Q8NHX4 192 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF519Q8TB69 540 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 HAS2Q92819 552 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 RFKQ969G6 155 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 C5orf34Q96MH7 638 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TUBA1CQ9BQE3 449 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 PIGQQ9BRB3 760 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TTTY12Q9BZ98 90 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR2B2Q9GZK3 357 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR51V1Q9H2C8 321 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF703Q9H7S9 590 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 VCX3AQ9NNX9 186 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 FGF20Q9NP95 211 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 CLEC2DQ9UHP7 191 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 BOKQ9UMX3 212 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 DIMT1Q9UNQ2 313 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 EXOGQ9Y2C4 368 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 KCNMB2Q9Y691 235 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 H0YC42 278 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 CDK2AP1O14519 115 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 RAMP1O60894 148 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 CEACAM4O75871 244 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 RAB36O95755 333 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 IGHMP01871 453 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 CELA3AP09093 270 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 GTF2E2P29084 291 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 GSTT1P30711 240 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 CLK1P49759 484 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 DIO1P49895 249 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 MEOX1P50221 254 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ETV1P50549 477 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR2B6P58173 313 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 RAC1P63000 192 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TLE3Q04726 772 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 PUDPQ08623 228 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 MELKQ14680 651 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 KLHL22Q53GT1 634 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SYT6Q5T7P8 510 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 BORAQ6PGQ7 559 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 IGFL2Q6UWQ7 119 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 NHLRC1Q6VVB1 395 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TMPPEQ6ZT21 453 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 JAZF1Q86VZ6 243 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms