RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZNF778Q96MU6 729 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 C6orf106Q9H6K1 298 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 APOA2P02652 100 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 HTR5AP47898 357 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PCBP4P57723 403 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 OR1D5P58170 312 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 RNF220Q5VTB9 566 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TMEM211Q6ICI0 200 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LPCAT3Q6P1A2 487 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 DPPA2Q7Z7J5 298 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ARFGAP1Q8N6T3 406 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 NPRL2Q8WTW4 380 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MITD1Q8WV92 249 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TMEM19Q96HH6 336 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ADOQ96SZ5 270 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 GSTO2Q9H4Y5 243 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 KCNJ16Q9NPI9 418 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC23A2Q9UGH3 650 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TRAV17A0A0B4J275 112 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 TPOP07202 933 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 SELEP16581 610 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 GNB2P62879 340 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 WDR74Q6RFH5 385 aaPredicted RBP7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 IGFN1Q86VF2 1251 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 TSPYL5Q86VY4 417 aaPredicted RBP7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 WDR5BQ86VZ2 330 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 CISD2Q8N5K1 135 aaKnown RBP7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 NETO1Q8TDF5 533 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 ANKRD9Q96BM1 317 aaPredicted RBP7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 ACPTQ9BZG2 426 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 EBF2Q9HAK2 575 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 DOCK11Q5JSL3 2073 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 TRAV18A0A075B6X5 111 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 A0A087WV62 115 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 EME2A4GXA9 379 aaPredicted RBP7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 SPINT2O43291 252 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 ARSBP15848 533 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 NFYAP23511 347 aaPredicted RBP7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 NCS1P62166 190 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 TBC1D28Q2M2D7 210 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 ACTBL2Q562R1 376 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 SBSNQ6UWP8 590 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 TCTEX1D2Q8WW35 142 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 TTC9Q92623 222 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 MBOAT4Q96T53 435 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 DHRS9Q9BPW9 319 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 GORASP2Q9H8Y8 452 aa7.71□□□□□ -1.17
PCDHB1-201ENST00000306549 A0A1B0GV50 99 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 TMEM11P17152 192 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 AGBL4Q5VU57 503 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 NEURL3Q96EH8 262 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 ABCG5Q9H222 651 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 RPH3ALQ9UNE2 315 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 COLQQ9Y215 455 aaPredicted RBP7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 PPP1R3DO95685 299 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 RNF144AP50876 292 aaPredicted RBP7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 SRPXP78539 464 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 TLE4Q04727 773 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 GALEQ14376 348 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 PLBD1Q6P4A8 553 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 TRIM73Q86UV7 250 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 SYT14Q8NB59 555 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 SORCS2Q96PQ0 1159 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 METTL9Q9H1A3 318 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 MED17Q9NVC6 651 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 CR2P20023 1033 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 APOBEC1P41238 236 aaKnown RBP7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 CCL11P51671 97 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 ZNF674Q2M3X9 581 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 SLC6A19Q695T7 634 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 C22orf42Q6IC83 251 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 GPR155Q7Z3F1 870 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 ABHD11Q8NFV4 315 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 CMTM3Q96MX0 182 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 PKMYT1Q99640 499 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 NMNAT2Q9BZQ4 307 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 TCEAL2Q9H3H9 227 aaPredicted RBP7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 HHLA2Q9UM44 414 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 P2RX6O15547 441 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 RPS18P62269 152 aaKnown RBP7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 BLOC1S1P78537 153 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 PCGF3Q3KNV8 242 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 FAM198BQ6UWH4 519 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 ASRGL1Q7L266 308 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 CNTNAP3BQ96NU0 1288 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 FKRPQ9H9S5 495 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 ISYNA1Q9NPH2 558 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 C14orf119Q9NWQ9 140 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 RNF24Q9Y225 148 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 NFS1Q9Y697 457 aa7.71□□□□□ -1.18
PCDHB1-201ENST00000306549 TMEM233B4DJY2 109 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 TNFSF15O95150 251 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 RAB3DO95716 219 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 THBS1P07996 1170 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 AKAIN1P0CW23 69 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 PPT1P50897 306 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 EMP3P54852 163 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 IHHQ14623 411 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms