RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 EFNA3P52797 238 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 IFITM2Q01629 132 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 PCOLCEQ15113 449 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 ATAD3CQ5T2N8 411 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 VASNQ6EMK4 673 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 CXXC5Q7LFL8 322 aaKnown RBP7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SHFQ7M4L6 423 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 MRGPRGQ86SM5 289 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 LHFPL3Q86UP9 236 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC43A2Q8N370 569 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 LNX2Q8N448 690 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 CDRT4Q8N9R6 151 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SYT14Q8NB59 555 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SPRYD4Q8WW59 207 aaPredicted RBP7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 HOXB13Q92826 284 aaPredicted RBP7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 TP53INP1Q96A56 240 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 ST6GAL2Q96JF0 529 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SAMD8Q96LT4 415 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 OR52D1Q9H346 318 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 UBQLN3Q9H347 655 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 INPP5EQ9NRR6 644 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 C14orf105Q9NVL8 296 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 TNFRSF10DQ9UBN6 386 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 ADAM30Q9UKF2 790 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 SEC16AO15027 2179 aa7.11□□□□□ -1.27
TM4SF1-201ENST00000305366 IGLV3-12A0A075B6K2 115 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 MEIOCA2RUB1 952 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CDHR4A6H8M9 788 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF860A6NHJ4 632 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CASKO14936 926 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 PRAMEF2O60811 474 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CH25HO95992 272 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ICAM2P13598 275 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 HTR2AP28223 471 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CAPZA2P47755 286 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 MTNR1BP49286 362 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 EVX1P49640 407 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 FXYD6P3P58550 94 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 HOXC5Q00444 222 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 OC90Q02509 493 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 DEFB134Q4QY38 66 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 KRTCAP3Q53RY4 240 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 PYDC2Q56P42 97 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF766Q5HY98 468 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 DCST2Q5T1A1 773 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 LCN1P1Q5VSP4 162 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 GARNL3Q5VVW2 1013 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF324BQ6AW86 544 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 SPINK14Q6IE38 97 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 RPUSD3Q6P087 351 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 NIPAL3Q6P499 406 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TMPRSS11FQ6ZWK6 438 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 MEPCEQ7L2J0 689 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CPEB2Q7Z5Q1 589 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CPOQ8IVL8 374 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 BEST3Q8N1M1 668 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ACBD7Q8N6N7 88 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ATP6V1C2Q8NEY4 427 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 BBS1Q8NFJ9 593 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 OR52L1Q8NGH7 329 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 OR51Q1Q8NH59 317 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 NEIL3Q8TAT5 605 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 FANK1Q8TC84 345 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TMEM239Q8WW34 195 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ACOT12Q8WYK0 555 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 HS6ST2Q96MM7 605 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 SECISBP2Q96T21 854 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ATF6BQ99941 703 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 HES7Q9BYE0 225 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 VN1R1Q9GZP7 353 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 C11orf54Q9H0W9 315 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 KCNN2Q9H2S1 579 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 SPACA6W5XKT8 324 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 DOPEY1Q5JWR5 2465 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CENPVL1A0A0U1RR11 272 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 FAM172BPA6NC97 362 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 OR5H15A6NDH6 313 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CCDC182A6NF36 153 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 B4DXG7 233 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 NPIPA5E9PKD4 350 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 GTPBP1O00178 669 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 PLA2G10O15496 165 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC19A2O60779 497 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TRIM3O75382 744 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 RGS9O75916 674 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 RCBTB2O95199 551 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC2A10O95528 541 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CRYABP02511 175 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 BMP7P18075 431 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CELP19835 753 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TBXA2RP21731 343 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 PAICSP22234 425 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 HLA-DMAP28067 261 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 NR4A2P43354 598 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TDGF1P3P51864 188 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CASP6P55212 293 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CTBP2P56545 445 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 GALEQ14376 348 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 OR1Q1Q15612 314 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms