RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 INTS12Q96CB8 462 aaKnown RBP24.12■■□□□ 1.45
HDAC3-201ENST00000305264 TXNDC15Q96J42 360 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 IFT27Q9BW83 186 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 POLDIP3Q9BY77 421 aaKnown RBP24.12■■□□□ 1.45
HDAC3-201ENST00000305264 C8orf4Q9NR00 106 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 E9PLN8 166 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 CRISP1P54107 249 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 MELKQ14680 651 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 ACKR1Q16570 336 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 GTF2IRD2BQ6EKJ0 949 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 SLC35D2Q76EJ3 337 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 GTF2IRD2Q86UP8 949 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 GMPPAQ96IJ6 420 aaPredicted RBP24.12■■□□□ 1.45
HDAC3-201ENST00000305264 TSPAN32Q96QS1 320 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 DMRTA2Q96SC8 542 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 VKORC1Q9BQB6 163 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 TOR3AQ9H497 397 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 NRIP3Q9NQ35 241 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 MEMO1Q9Y316 297 aa24.12■■□□□ 1.45
HDAC3-201ENST00000305264 INTS1Q8N201 2190 aaKnown RBP24.11■■□□□ 1.45
HDAC3-201ENST00000305264 HIVEP3Q5T1R4 2406 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 A0A1W2PRG6 482 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 CD14P08571 375 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 NTF4P34130 210 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 TIMP3P35625 211 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 RAD23AP54725 363 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 ESRRGP62508 458 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 PMPCAQ10713 525 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 GUSBP1Q15486 140 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 DPY19L2P2Q6ZN68 376 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 ATCAYQ86WG3 371 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 OR4Q3Q8NH05 313 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 MBOAT4Q96T53 435 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 NDEL1Q9GZM8 345 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 BHLHE40O14503 412 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 SS18L1O75177 396 aaPredicted RBP24.11■■□□□ 1.45
HDAC3-201ENST00000305264 AGTR1P30556 359 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 PER3P56645 1201 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 FOXF2Q12947 444 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 NPRL3Q12980 569 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 TMEM236Q5W0B7 351 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 OR2A2Q6IF42 318 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 FAM122BQ7Z309 247 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 ZNF570Q96NI8 536 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 SMPD3Q9NY59 655 aaPredicted RBP24.11■■□□□ 1.45
HDAC3-201ENST00000305264 EMC3Q9P0I2 261 aa24.11■■□□□ 1.45
HDAC3-201ENST00000305264 MYO7BQ6PIF6 2116 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 ZNF724A8MTY0 619 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 YES1P07947 543 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 CLDN17P56750 224 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 PRR7Q8TB68 274 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 EMC6Q9BV81 110 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 TXNIPQ9H3M7 391 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 ENOPH1Q9UHY7 261 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 IER3IP1Q9Y5U9 82 aa24.1■■□□□ 1.45
HDAC3-201ENST00000305264 IL2RAP01589 272 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 IGHMP01871 453 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 CEACAM8P31997 349 aaPredicted RBP24.09■■□□□ 1.45
HDAC3-201ENST00000305264 PTGES3Q15185 160 aaKnown RBP24.09■■□□□ 1.45
HDAC3-201ENST00000305264 SNCBQ16143 134 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 OR2T33Q8NG76 320 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 VCXQ9H320 206 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 GP6Q9HCN6 339 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 GLRX2Q9NS18 164 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 ZNF346Q9UL40 294 aaKnown RBP24.09■■□□□ 1.45
HDAC3-201ENST00000305264 PCNX1Q96RV3 2341 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 CCL21O00585 134 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 GPR171O14626 319 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 CDH2P19022 906 aaPredicted RBP24.09■■□□□ 1.45
HDAC3-201ENST00000305264 SIRPAP78324 504 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 ASB10Q8WXI3 467 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 RASD2Q96D21 266 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 Q96M85 177 aa24.09■■□□□ 1.45
HDAC3-201ENST00000305264 ERMAPQ96PL5 475 aaPredicted RBP24.09■■□□□ 1.45
HDAC3-201ENST00000305264 NPIPB13A6NJU9 1138 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 NPIPB4C9JG80 1138 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 TMIGD3P0DMS9 266 aaPredicted RBP24.08■■□□□ 1.45
HDAC3-201ENST00000305264 AQP4P55087 323 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 BIDP55957 195 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 RPL27P61353 136 aaKnown RBP24.08■■□□□ 1.45
HDAC3-201ENST00000305264 GINS1Q14691 196 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 PGGHGQ32M88 737 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 ARMC4Q5T2S8 1044 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 SLC27A4Q6P1M0 643 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.08■■□□□ 1.45
HDAC3-201ENST00000305264 NUFIP2Q7Z417 695 aaKnown RBP24.08■■□□□ 1.45
HDAC3-201ENST00000305264 FJX1Q86VR8 437 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 VCX3BQ9H321 246 aa24.08■■□□□ 1.45
HDAC3-201ENST00000305264 NOSIPQ9Y314 301 aaKnown RBP24.08■■□□□ 1.45
HDAC3-201ENST00000305264 FREM1Q5H8C1 2179 aa24.08■■□□□ 1.44
HDAC3-201ENST00000305264 TEX13CA0A0J9YWL9 993 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 BCL10O95999 233 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 EDNRAP25101 427 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 GIPRP48546 466 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 DAP3P51398 398 aaKnown RBP24.07■■□□□ 1.44
HDAC3-201ENST00000305264 CDK5Q00535 292 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 TMEM201Q5SNT2 666 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 ACSM5Q6NUN0 579 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 FAM214BQ7L5A3 538 aa24.07■■□□□ 1.44
HDAC3-201ENST00000305264 LNX2Q8N448 690 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms