RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FANK1Q8TC84 345 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 HIST1H2ACQ93077 130 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 UBE2FQ969M7 185 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 NMD3Q96D46 503 aaKnown RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 Q96M85 177 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 EMC6Q9BV81 110 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 KATNB1Q9BVA0 655 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 TSSK6Q9BXA6 273 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 MRPL13Q9BYD1 178 aaKnown RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 TXNIPQ9H3M7 391 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 ZNF556Q9HAH1 456 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 SLC25A19Q9HC21 320 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 KRCC1Q9NPI7 259 aaPredicted RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 INIPQ9NRY2 104 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 FAM118AQ9NWS6 357 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 MED29Q9NX70 200 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 MCTS1Q9ULC4 181 aaKnown RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 OSGIN2Q9Y236 505 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 DOCK7Q96N67 2140 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 A0A0G2JNJ9 132 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 E9PLN8 166 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 H0YJX3 145 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SLC16A6O15403 523 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 RNF13O43567 381 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SYNGR4O95473 234 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SLC2A10O95528 541 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 PLGP00747 810 aaPredicted RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 APEHP13798 732 aaKnown RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 AGTR1P30556 359 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 CDKN2AP42771 156 aaKnown RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 POU3F1Q03052 451 aaPredicted RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 LGALS3BPQ08380 585 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 PMPCAQ10713 525 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 MELKQ14680 651 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 GINS1Q14691 196 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 HIST3H3Q16695 136 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 MESTQ5EB52 335 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 PHYHD1Q5SRE7 291 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SLX4IPQ5VYV7 408 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 C12orf73Q69YU5 71 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 B3GNT6Q6ZMB0 384 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 PTCHD4Q6ZW05 846 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SLC35D2Q76EJ3 337 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 LINGO2Q7L985 606 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 GPAT4Q86UL3 456 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 LIX1LQ8IVB5 337 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 GCNT2Q8N0V5 402 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 ARIH2OSQ8N7S6 290 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 ANKK1Q8NFD2 765 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 ASB10Q8WXI3 467 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 HDAC2Q92769 488 aaKnown RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 TMEM45BQ96B21 275 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SDCCAG3Q96C92 435 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 ZHX1-C8orf76Q96EF9 292 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 GMPPAQ96IJ6 420 aaPredicted RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 HRASLS5Q96KN8 279 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 PITX2Q99697 317 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 VKORC1Q9BQB6 163 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 GP6Q9HCN6 339 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 C8orf4Q9NR00 106 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 SMPD3Q9NY59 655 aaPredicted RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 Q9UFV3 132 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 NDRG4Q9ULP0 352 aaKnown RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 NOX1Q9Y5S8 564 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 IER3IP1Q9Y5U9 82 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 ARHGAP21Q5T5U3 1957 aa8.41□□□□□ -1.06
RFX3-201ENST00000302303 PHF3Q92576 2039 aaKnown RBP8.41□□□□□ -1.06
RFX3-201ENST00000302303 IGKV1D-43A0A0B4J1Z2 117 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 SLC35F4A4IF30 521 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 M0R129 80 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 YES1P07947 543 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 HIST1H1CP16403 213 aaKnown RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 ZNF43P17038 809 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 POU1F1P28069 291 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 GTF2E2P29084 291 aaKnown RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 SDHAP31040 664 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 SLC6A6P31641 620 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 SELENOPP49908 381 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 CLDN17P56750 224 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 RPL27P61353 136 aaKnown RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 IL1RL1Q01638 556 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 RBPJQ06330 500 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 RNPS1Q15287 305 aaKnown RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 PGGHGQ32M88 737 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 RIPPLY2Q5TAB7 128 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 RPL13AP3Q6NVV1 102 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 VWA1Q6PCB0 445 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 USP51Q70EK9 711 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 FAM214BQ7L5A3 538 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 CHMP1BQ7LBR1 199 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 BTLAQ7Z6A9 289 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 UEVLDQ8IX04 471 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 NPEPL1Q8NDH3 523 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 OR6X1Q8NH79 312 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 ZNRF4Q8WWF5 429 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 TFAP2CQ92754 450 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 INTS12Q96CB8 462 aaKnown RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 RASD2Q96D21 266 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms