RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 KLF4O43474 513 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 PRAMEF2O60811 474 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 SIX6O95475 246 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 S100A12P80511 92 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 GRK1Q15835 563 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 CCDC157Q569K6 752 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 APOOLQ6UXV4 268 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 DBX2Q6ZNG2 339 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 Q7L0L9 218 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 GPR135Q8IZ08 494 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 KDM8Q8N371 416 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 FGF11Q92914 225 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 CTHRC1Q96CG8 243 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 POM121Q96HA1 1249 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 THAP7Q9BT49 309 aaPredicted RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 NDC1Q9BTX1 674 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 SLC25A18Q9H1K4 315 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 RNF215Q9Y6U7 377 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 THADAQ6YHU6 1953 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 RNF13O43567 381 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 WISP1O95388 367 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 MPC2O95563 127 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 SRFP11831 508 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 HK1P19367 917 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 POU3F2P20265 443 aaPredicted RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 CLDN20P56880 219 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 TPBGQ13641 420 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 C1QL3Q5VWW1 255 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 BICRALQ6AI39 1079 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 TMEM91Q6ZNR0 172 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 RTL4Q6ZR62 310 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 LANCL3Q6ZV70 420 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 NR2C2APQ86WQ0 139 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF527Q8NB42 609 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 OR6M1Q8NGM8 313 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 TCTN2Q96GX1 697 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 CXorf58Q96LI9 332 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 MOGAT1Q96PD6 335 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 DDOQ99489 341 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF416Q9BWM5 594 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 OR51J1Q9H342 316 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 ESRP2Q9H6T0 727 aaKnown RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 CUTCQ9NTM9 273 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 SLC39A1Q9NY26 324 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 FLVCR2Q9UPI3 526 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 IL1AP01583 271 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SBK2P0C263 348 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 FOLR1P15328 257 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SOX2P48431 317 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 CCR5P51681 352 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 LIMK1P53667 647 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ATP12AP54707 1039 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 PPP3R1P63098 170 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 DMWDQ09019 674 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 TOMM34Q15785 309 aaPredicted RBP9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ARHGAP40Q5TG30 622 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 HLA-DQA1Q5Y7H0 255 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 LEG1Q6P5S2 330 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 MS4A15Q8N5U1 240 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 GHSRQ92847 366 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF524Q96C55 264 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SGTBQ96EQ0 304 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 GAL3ST1Q99999 423 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 NUDT22Q9BRQ3 303 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ORAI3Q9BRQ5 295 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 PHF7Q9BWX1 381 aaPredicted RBP9.22□□□□□ -0.93
FOXN4-201ENST00000299162 RTN4RQ9BZR6 473 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 TRIM36Q9NQ86 728 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 CMC2Q9NRP2 79 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 NTMQ9P121 344 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 PLCL2Q9UPR0 1127 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 RASD1Q9Y272 281 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SLC35A3Q9Y2D2 325 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SLC6A5Q9Y345 797 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 AK6Q9Y3D8 172 aaKnown RBP9.22□□□□□ -0.93
FOXN4-201ENST00000299162 MAB21L2Q9Y586 359 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 A0A1B0GTH9 108 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SERINC4A6NH21 518 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SCDO00767 359 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 GMDSO60547 372 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 HLA-DQA2P01906 255 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ACSM4P0C7M7 580 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 CD27P26842 260 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SLC6A6P31641 620 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 CLDN12P56749 244 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 PRTGQ2VWP7 1150 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 SLC25A35Q3KQZ1 300 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 LGALSLQ3ZCW2 172 aaPredicted RBP9.22□□□□□ -0.93
FOXN4-201ENST00000299162 MARCH3Q86UD3 253 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 GID4Q8IVV7 300 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 LNX2Q8N448 690 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 OR2I1PQ8NGU4 316 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ATOH1Q92858 354 aaPredicted RBP9.22□□□□□ -0.93
FOXN4-201ENST00000299162 RFT1Q96AA3 541 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ELMOD3Q96FG2 381 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 TMEM43Q9BTV4 400 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 CACNG6Q9BXT2 260 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 TRIM2Q9C040 744 aa9.22□□□□□ -0.93
FOXN4-201ENST00000299162 ANKRD19PQ9H560 264 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms