RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PRR23D1E9PI22 279 aaPredicted RBP22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 SEC14L5O43304 696 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 RAMP1O60894 148 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 PLGP00747 810 aaPredicted RBP22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 PRR23D2P0DMB1 279 aaPredicted RBP22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF24P17028 368 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 EEF1B2P24534 225 aaKnown RBP22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 TUBA4AP68366 448 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 UBQLNLQ8IYU4 475 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 OR10D3Q8NH80 312 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 OXGR1Q96P68 337 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 MED20Q9H944 212 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 CNOT2Q9NZN8 540 aaKnown RBP22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 B3GNT3Q9Y2A9 372 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 TRGV5A0A0B4J1U4 118 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 A0A1W2PRG6 482 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 DBTP11182 482 aaKnown RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 SLC2A5P22732 501 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 ACVR2AP27037 513 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 HSF1Q00613 529 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 ZNF91Q05481 1191 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 PIGFQ07326 219 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 TMEM225Q6GV28 225 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 ZNF773Q6PK81 442 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 ZPLD1Q8TCW7 415 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 ZCCHC14Q8WYQ9 949 aaKnown RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 RFKQ969G6 155 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 NAA11Q9BSU3 229 aaPredicted RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 MRPS26Q9BYN8 205 aaKnown RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 ERVK-18Q9QC07 812 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 RASD1Q9Y272 281 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 TP53TG5Q9Y2B4 290 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 NOX1Q9Y5S8 564 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 SNTNA6NMZ2 147 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 TFECO14948 347 aaPredicted RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 MRPS14O60783 128 aaKnown RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 PIPP12273 146 aaPredicted RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 HTR1FP30939 366 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 KRR1Q13601 381 aaKnown RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 PLEKHN1Q494U1 663 aaPredicted RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 NIPAL3Q6P499 406 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 AHSA2Q719I0 299 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 MEPCEQ7L2J0 689 aaKnown RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 UCN2Q96RP3 112 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 CCNB1IP1Q9NPC3 277 aa22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 H2AFY2Q9P0M6 372 aaPredicted RBP22.01■■□□□ 1.11
GTF2A1-201ENST00000298173 EFCAB10A6NFE3 127 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 CXCL13O43927 109 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 SERPINI2O75830 405 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 VAMP5O95183 116 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 IFNGR1P15260 489 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 ENPP1P22413 925 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 CDH11P55287 796 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 POU3F1Q03052 451 aaPredicted RBP22■■□□□ 1.11
GTF2A1-201ENST00000298173 LINC00303Q3SY05 128 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 SLC35D2Q76EJ3 337 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 GID4Q8IVV7 300 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 SIAH3Q8IW03 269 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 EXD3Q8N9H8 876 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 SNX18Q96RF0 628 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 COPS4Q9BT78 406 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 LDAHQ9H6V9 325 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 LHX6Q9UPM6 363 aa22■■□□□ 1.11
GTF2A1-201ENST00000298173 A0A1B0GVC2 190 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 SMAD9O15198 467 aaKnown RBP21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 WISP2O76076 250 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 TFAP2AP05549 437 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 ATP6V1B1P15313 513 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 PAICSP22234 425 aaKnown RBP21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 ACVR1BP36896 505 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 MVKQ03426 396 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 DBPQ10586 325 aaPredicted RBP21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 POU4F3Q15319 338 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 PDSS1Q5T2R2 415 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 LEG1Q6P5S2 330 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 SPARTQ8N0X7 666 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 ASB10Q8WXI3 467 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 TXNDC15Q96J42 360 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 TEAD3Q99594 435 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 TIMP4Q99727 224 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 PLSCR2Q9NRY7 297 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 SPRR3Q9UBC9 169 aa21.99■■□□□ 1.11
GTF2A1-201ENST00000298173 TRAF3IP2O43734 574 aaPredicted RBP21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 BCL10O95999 233 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 CLPTM1O96005 669 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 CDK1P06493 297 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 CLUP10909 449 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 EIF1AXP47813 144 aaKnown RBP21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 MTNR1AP48039 350 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 DAP3P51398 398 aaKnown RBP21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 SLC25A1P53007 311 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 ST3GAL4Q11206 333 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 TMED1Q13445 227 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 PRSS48Q7RTY5 328 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 ADCK1Q86TW2 530 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 JAZF1Q86VZ6 243 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 WDFY1Q8IWB7 410 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 UEVLDQ8IX04 471 aa21.98■■□□□ 1.11
GTF2A1-201ENST00000298173 KISS1RQ969F8 398 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms