RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 EIF2B1Q14232 305 aaKnown RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 SLC35D2Q76EJ3 337 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 C12orf45Q8N5I9 185 aaPredicted RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 OR9K2Q8NGE7 335 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 UPRTQ96BW1 309 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 DDIT4LQ96D03 193 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 ACSS1Q9NUB1 689 aaPredicted RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 GGT3PA6NGU5 568 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 IFNA21P01568 189 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 ERCC1P07992 297 aaPredicted RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 RGS19P49795 217 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 LTBQ06643 244 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 MALLQ13021 153 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 FAM209AQ5JX71 171 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 TPRA1Q86W33 373 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 PFN4Q8NHR9 129 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 C3orf49Q96BT1 292 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 BARHL1Q9BZE3 327 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 MBD1Q9UIS9 605 aaPredicted RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 INTS1Q8N201 2190 aaKnown RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 GLULP15104 373 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 S100A11P31949 105 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 MPLP40238 635 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
HPS3-201ENST00000296051 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 NKAPLQ5M9Q1 402 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 DCST2Q5T1A1 773 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 ZBTB37Q5TC79 503 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 ESX1Q8N693 406 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 KIAA1958Q8N8K9 716 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 PARPBPQ9NWS1 579 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 TAS2R8Q9NYW2 309 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 ARGFXA6NJG6 315 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 TNFSF15O95150 251 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 KNG1P01042 644 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 IGHEP01854 428 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 RPS27P42677 84 aaKnown RBP12.38□□□□□ -0.43
HPS3-201ENST00000296051 RAB5BP61020 215 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 DGLUCYQ7Z3D6 616 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 MFSD8Q8NHS3 518 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 SLC7A11Q9UPY5 501 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 SLC6A5Q9Y345 797 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 IGHV3-20A0A0C4DH32 117 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
HPS3-201ENST00000296051 OR7A5Q15622 319 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 TMEM52BQ4KMG9 183 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 NKAIN1Q4KMZ8 207 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 TMEM150AQ86TG1 271 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 OR51D1Q8NGF3 324 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 TMEM106AQ96A25 262 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 KCTD12Q96CX2 325 aaKnown RBP12.38□□□□□ -0.43
HPS3-201ENST00000296051 ZNF416Q9BWM5 594 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 LIN7BQ9HAP6 207 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 TNFRSF10CO14798 259 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 IGLV3-27P01718 113 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
HPS3-201ENST00000296051 EPHA5P54756 1037 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 LAIR2Q6ISS4 152 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 SIRT6Q8N6T7 355 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 AIFM2Q9BRQ8 373 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 RGCCQ9H4X1 137 aa12.38□□□□□ -0.43
HPS3-201ENST00000296051 NAT1P18440 290 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 RAD52P43351 418 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 ACTBP60709 375 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 ACTG1P63261 375 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 IL13RA1P78552 427 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 TPBGQ13641 420 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 OR5T2Q8NGG2 359 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 NPRL2Q8WTW4 380 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 NINJ1Q92982 152 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 ARL5BQ96KC2 179 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 TEAD3Q99594 435 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 A4GALTQ9NPC4 353 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 U3KQ87 197 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 KIF13BQ9NQT8 1826 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 CCSO14618 274 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 FBXO24O75426 580 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 LALBAP00709 142 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 ATP1B1P05026 303 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 CHRM4P08173 479 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 RFX2P48378 723 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 FAM74A1Q5RGS3 127 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 ZNF585AQ6P3V2 769 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 ZADH2Q8N4Q0 377 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 OR2T4Q8NH00 348 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 HCAR1Q9BXC0 346 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 CASP8AP2Q9UKL3 1982 aa12.37□□□□□ -0.43
HPS3-201ENST00000296051 KRBOX1C9JBD0 128 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms