RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PLCXD3Q63HM9 321 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF761Q86XN6 746 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 BPIFA2Q96DR5 249 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 C3orf30Q96M34 536 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GORASP2Q9H8Y8 452 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 MSL2Q9HCI7 577 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM221BA6H8Z2 402 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 AQP7P3A6NL99 342 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 BCL2L11O43521 198 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CLEC3BP05452 202 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 AKR1A1P14550 325 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF17P17021 662 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF154Q13106 437 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 PLPP4Q5VZY2 271 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF66Q6ZN08 573 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 Q6ZVU0 165 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZDHHC14Q8IZN3 488 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 BORCS6Q96GS4 357 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ISYNA1Q9NPH2 558 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 PXDNQ92626 1479 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 LCN15Q6UWW0 184 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 OR4N2Q8NGD1 307 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 OR52I1Q8NGK6 324 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ST6GALNAC4Q9H4F1 302 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 HEATR5AQ86XA9 2040 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 RPA2P15927 270 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 OR5I1Q13606 314 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 GRM7Q14831 915 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 PM20D1Q6GTS8 502 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ZIC5Q96T25 663 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 SGPP1Q9BX95 441 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 BMPR1BO00238 502 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 LPLP06858 475 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 PRSS56P0CW18 603 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 MGMTP16455 207 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ACRV1P26436 265 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ARRB2P32121 409 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 BMPR1AP36894 532 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC6A12P48065 614 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 GZMKP49863 264 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 MAP2K6P52564 334 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 TGFBR3Q03167 851 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF813Q6ZN06 617 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 KCNG2Q9UJ96 466 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 KCNK6Q9Y257 313 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF98A6NK75 572 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 EIF4EP06730 217 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 GABRA4P48169 554 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 CLDN20P56880 219 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ELOVL3Q9HB03 270 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 SNX11Q9Y5W9 270 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 NDUFB2O95178 105 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 GASTP01350 101 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 FBLP22087 321 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 FCGR2CP31995 323 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 PPP1CBP62140 327 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 MAMDC2Q7Z304 686 aaPredicted RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR171O14626 319 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 DEFB134Q4QY38 66 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 VGLL2Q8N8G2 317 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ARL14EPQ8N8R7 260 aaPredicted RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 HERPUD2Q9BSE4 406 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 HRASLSQ9HDD0 168 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 F5P12259 2224 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF728P0DKX0 622 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 CTU1Q7Z7A3 348 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 OR52I2Q8NH67 350 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 PPTC7Q8NI37 304 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF566Q969W8 418 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 NOL4LQ96MY1 436 aaPredicted RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 MAP3K3Q99759 626 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 DUOX1Q9NRD9 1551 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 SPATA31A3Q5VYP0 1347 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 AP4M1O00189 453 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 B4GALT3O60512 393 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 LRP3O75074 770 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 STC2O76061 302 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 AQP8O94778 261 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 TYRP1P17643 537 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ARSDP51689 593 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 RPL22L1Q6P5R6 122 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 HHATLQ9HCP6 504 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC35A2P78381 396 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 NXPE4Q6UWF7 544 aa10.94□□□□□ -0.66
SHROOM3-201ENST00000296043 ARL6IP1Q15041 203 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC10A6Q3KNW5 377 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 C17orf78Q8N4C9 275 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR8D4Q8NGM9 314 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 TMEM234Q8WY98 164 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF280AP59817 542 aaPredicted RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 CAMK2DQ13557 499 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR4A47Q6IF82 309 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 KDELC1Q6UW63 502 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 CASP7P55210 303 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 BAMBIQ13145 260 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF787Q6DD87 383 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SPTSSAQ969W0 71 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms