RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 OR52J3Q8NH60 311 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 MOSPD2Q8NHP6 518 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 SLC7A13Q8TCU3 470 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 ACOT11Q8WXI4 607 aaPredicted RBP11.76□□□□□ -0.53
VPS28-201ENST00000292510 MCUR1Q96AQ8 359 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 ASB9Q96DX5 294 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 PIK3IP1Q96FE7 263 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 PIP5K1AQ99755 562 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 BTBD10Q9BSF8 475 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 OR10A4Q9H209 315 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 CLEC4MQ9H2X3 399 aaPredicted RBP11.76□□□□□ -0.53
VPS28-201ENST00000292510 TAS2R16Q9NYV7 291 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 NOX1Q9Y5S8 564 aa11.76□□□□□ -0.53
VPS28-201ENST00000292510 A0A1W2PRQ8 180 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 SLC35F4A4IF30 521 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 ACOT8O14734 319 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 KLF4O43474 513 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 SLC43A1O75387 559 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 F13BP05160 661 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 ITGA2P17301 1181 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 AQP2P41181 271 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 GPR4P46093 362 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 BIDP55957 195 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 SPIBQ01892 262 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 PRKCDQ05655 676 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 ZP4Q12836 540 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 CAMK2DQ13557 499 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 DGCR6Q14129 220 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 LAPTM4AQ15012 233 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 SEC23BQ15437 767 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 GABRA6Q16445 453 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 PHYHD1Q5SRE7 291 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 PGM2L1Q6PCE3 622 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 CDC20BQ86Y33 519 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 ZDHHC21Q8IVQ6 265 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 ANKK1Q8NFD2 765 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 OR52N5Q8NH56 324 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 LIPHQ8WWY8 451 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 DHRS1Q96LJ7 313 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 CADM1Q9BY67 442 aaKnown RBP11.75□□□□□ -0.53
VPS28-201ENST00000292510 MUC13Q9H3R2 512 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 IL1RAPQ9NPH3 570 aa11.75□□□□□ -0.53
VPS28-201ENST00000292510 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 OR5H1A6NKK0 313 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 EFCAB9A8MZ26 197 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 ZNF587BE7ETH6 402 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 M0R3G1 203 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 AKAP8O43823 692 aaKnown RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 DNAJC8O75937 253 aaPredicted RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 SAGP10523 405 aaPredicted RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 LOXP28300 417 aaPredicted RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 MPGP29372 298 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 ROR2Q01974 943 aaKnown RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 PPA1Q15181 289 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 MTX3Q5HYI7 312 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 SEZ6L2Q6UXD5 910 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 RNF113BQ8IZP6 322 aaKnown RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 GPR137CQ8N3F9 429 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 OR13C2Q8NGS9 318 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 OR51A7Q8NH64 312 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 HSD17B8Q92506 261 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 ZNF837Q96EG3 531 aaPredicted RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 FAM46AQ96IP4 442 aaKnown RBP11.74□□□□□ -0.53
VPS28-201ENST00000292510 FUZQ9BT04 418 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 LIME1Q9H400 295 aa11.74□□□□□ -0.53
VPS28-201ENST00000292510 OR6C65A6NJZ3 312 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 ZNF726A6NNF4 738 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 CDC42EP2O14613 210 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 GSC2O15499 205 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 CLOCKO15516 846 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
VPS28-201ENST00000292510 GADD45GO95257 159 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 TSPAN19P0C672 248 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 RRM2P31350 389 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 ERFP50548 548 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 FHL1Q13642 323 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 CEACAM16Q2WEN9 425 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 HIKESHIQ53FT3 197 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 BEX5Q5H9J7 111 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 HMBOX1Q6NT76 420 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 RRM2BQ7LG56 351 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 ABHD12BQ7Z5M8 362 aaPredicted RBP11.73□□□□□ -0.53
VPS28-201ENST00000292510 IGFN1Q86VF2 1251 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 C20orf196Q8IYI0 205 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 PLPPR2Q96GM1 343 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 LRGUKQ96M69 825 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 MUS81Q96NY9 551 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 TNFRSF13CQ96RJ3 184 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 CRLF2Q9HC73 371 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 GPR35Q9HC97 309 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 INIPQ9NRY2 104 aa11.73□□□□□ -0.53
VPS28-201ENST00000292510 NPAP1Q9NZP6 1156 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms