RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LANCL3Q6ZV70 420 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 Q7L0L9 218 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ELMOD2Q8IZ81 293 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 DCLRE1CQ96SD1 692 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC38A1Q9H2H9 487 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OR51J1Q9H342 316 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GAREM1Q9H706 876 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PLEK2Q9NYT0 353 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 KCNS2Q9ULS6 477 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 F5H0A9 414 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNHIT1O43257 154 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FARS2O95363 451 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 AK1P00568 194 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 EIF4EP06730 217 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 CASRP41180 1078 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC26A5P58743 744 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GLO1Q04760 184 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 MPEG1Q2M385 716 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ABI3BPQ7Z7G0 1075 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GLB1L2Q8IW92 636 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TP53I13Q8NBR0 393 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC2A12Q8TD20 617 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 NR4A3Q92570 626 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 HLA-CQ95604 372 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 YIPF6Q96EC8 236 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 DERL3Q96Q80 235 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF160Q9HCG1 818 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 MED29Q9NX70 200 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 POLHQ9Y253 713 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 COA3Q9Y2R0 106 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 EP300Q09472 2414 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 NOTCH4Q99466 2003 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ANKRD34BA5PLL1 514 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 HCRTR1O43613 425 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 DBHP09172 617 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 MRPL19P49406 292 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 CLDN17P56750 224 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SIRPAP78324 504 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OR51D1Q8NGF3 324 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CCDC107Q8WV48 283 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CCDC74AQ96AQ1 378 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SCP2D1Q9UJQ7 156 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SPINT1O43278 529 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 RP2O75695 350 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OLFM2O95897 454 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 P04436 131 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CTSBP07858 339 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PRKAR1BP31321 381 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 DGCR2P98153 550 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OCLNQ16625 522 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FAHD1Q6P587 224 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 KIRREL2Q6UWL6 708 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CA13Q8N1Q1 262 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 BHLHE23Q8NDY6 225 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 LILRB4Q8NHJ6 448 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF845Q96IR2 970 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 BANF2Q9H503 90 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 EMC7Q9NPA0 242 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TAS2R3Q9NYW6 316 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CTSFQ9UBX1 484 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ADAM29Q9UKF5 820 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 FANCMQ8IYD8 2048 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 IGHV5-51A0A0C4DH38 117 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FITM1A5D6W6 292 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CCSO14618 274 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SURF4O15260 269 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FABP7O15540 132 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 APOC3P02656 99 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 NID1P14543 1247 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF28P17035 718 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PSPHP78330 225 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC9A3R2Q15599 337 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 NXNL2Q5VZ03 156 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TCEAL6Q6IPX3 200 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ALKAL2Q6UX46 152 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 IL17RDQ8NFM7 739 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OR13C9Q8NGT0 318 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OR10K1Q8NGX5 313 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GPR148Q8TDV2 347 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GABARAPL3Q9BY60 117 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 AUNIPQ9H7T9 357 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 NOX3Q9HBY0 568 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 B3GAT2Q9NPZ5 323 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TESQ9UGI8 421 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 DIMT1Q9UNQ2 313 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 C14orf166Q9Y224 244 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC35A3Q9Y2D2 325 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FREM3P0C091 2139 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TMED7-TICAM2A0A0A6YYA0 188 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 DISC1C4P0D8 188 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 M0R036 132 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CDC42EP2O14613 210 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms