RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 RPTNQ6XPR3 784 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 OR13C5Q8NGS8 318 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 LCN9Q8WX39 176 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 RAB40AQ8WXH6 277 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 OR2M4Q96R27 311 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SLC19A3Q9BZV2 496 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 OR51V1Q9H2C8 321 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 FANCFQ9NPI8 374 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 PRDM6Q9NQX0 595 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 FLRT3Q9NZU0 649 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 PCDHGA5Q9Y5G8 931 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 ETV7Q9Y603 341 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 LRP4O75096 1905 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 DOCK9Q9BZ29 2069 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 A0A1B0GWA3 101 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 CYR61O00622 381 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 PEX12O00623 359 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SCAMP1O15126 338 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 KAT7O95251 611 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 APOC1P02654 83 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SGCGQ13326 291 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 TMEM31Q5JXX7 168 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 ZNF684Q5T5D7 378 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SYT9Q86SS6 491 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SLC35F2Q8IXU6 374 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 OR8K3Q8NH51 312 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 OIT3Q8WWZ8 545 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SLC17A9Q9BYT1 436 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 ANKRD10Q9NXR5 420 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 COA4Q9NYJ1 87 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 GDE1Q9NZC3 331 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SERGEFQ9UGK8 458 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 AK6Q9Y3D8 172 aaKnown RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 TICRRQ7Z2Z1 1910 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 GXYLT2A0PJZ3 443 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 PQLC2LA1A4F0 135 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 F5H5P2 479 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 P2RX6O15547 441 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 CDC123O75794 336 aaPredicted RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 NDUFB2O95178 105 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 MRPL3P09001 348 aaKnown RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 ZNF141Q15928 474 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 ZNF776Q68DI1 518 aaPredicted RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 DPY19L2P2Q6ZN68 376 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 DNAAF1Q8NEP3 725 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 GINS4Q9BRT9 223 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 FBRSQ9HAH7 460 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 DNAJB12Q9NXW2 375 aaKnown RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 TAS2R10Q9NYW0 307 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 KLK11Q9UBX7 282 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 SPACA6W5XKT8 324 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 TRAV27A0A087WT01 109 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 A0A1W2PPK0 400 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 PRSS38A1L453 326 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 IFITM5A6NNB3 132 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 SOX1O00570 391 aaPredicted RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 LATO43561 262 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 SPDEFO95238 335 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 PAK4O96013 591 aaPredicted RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 CLUP10909 449 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RPA2P15927 270 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 GJA4P35212 333 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 PPP2CBP62714 309 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 PPP2CAP67775 309 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 CCDC157Q569K6 752 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 SLC6A19Q695T7 634 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 FCRL6Q6DN72 434 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 OR10K1Q8NGX5 313 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 ASB13Q8WXK3 278 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 GCDHQ92947 438 aaPredicted RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 OR1F2PQ96R84 312 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 TNFRSF13CQ96RJ3 184 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 GFI1Q99684 422 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 NCDNQ9UBB6 729 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 MRTO4Q9UKD2 239 aaKnown RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 CABIN1Q9Y6J0 2220 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 A6NCN8 305 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 NPIPB9F8W1W9 429 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 LDB3O75112 727 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RASGRP1O95267 797 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RLN2P04090 185 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 NGFRP08138 427 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 UBBP0CG47 229 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 UBCP0CG48 685 aaKnown RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 SRMP19623 302 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 MPGP29372 298 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RORAP35398 523 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 SLC16A1P53985 500 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 H2BFSP57053 126 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RPS4XP62701 263 aaKnown RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 RPS27AP62979 156 aaKnown RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 UBA52P62987 128 aaKnown RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 ERVK-25P63136 954 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 TFF2Q03403 129 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RUNX3Q13761 415 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 ULK3Q6PHR2 472 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 VITQ6UXI7 678 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 RNF44Q7L0R7 432 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms