RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SLC25A37Q9NYZ2 338 aa11.06□□□□□ -0.64
CD44-203ENST00000278386 CCDC167Q9P0B6 97 aa11.06□□□□□ -0.64
CD44-203ENST00000278386 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.06□□□□□ -0.64
CD44-203ENST00000278386 ANK2Q01484 3957 aa11.06□□□□□ -0.64
CD44-203ENST00000278386 IGKV1D-42A0A075B6H8 117 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 ERLIN1O75477 346 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 STAMBPO95630 424 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 TGFAP01135 160 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 CD79AP11912 226 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 DAOP14920 347 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 AQP1P29972 269 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 SRSF2Q01130 221 aaKnown RBP11.05□□□□□ -0.64
CD44-203ENST00000278386 MFSD13AQ14CX5 517 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 ADRM1Q16186 407 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 GLIPR1L2Q4G1C9 344 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 LRIF1Q5T3J3 769 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 FAM91A1Q658Y4 838 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 ULK3Q6PHR2 472 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 ZNF813Q6ZN06 617 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 COMTD1Q86VU5 262 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 RANBP3LQ86VV4 465 aaPredicted RBP11.05□□□□□ -0.64
CD44-203ENST00000278386 MSRB3Q8IXL7 192 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 CDK20Q8IZL9 346 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 LRRC8CQ8TDW0 803 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 CKAP2Q8WWK9 683 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 ZNF607Q96SK3 696 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 EMC6Q9BV81 110 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 TPK1Q9H3S4 243 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 NOX3Q9HBY0 568 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 VAPAQ9P0L0 249 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 SLAMF8Q9P0V8 285 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 CORO2BQ9UQ03 480 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 POFUT2Q9Y2G5 429 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 CORINQ9Y5Q5 1042 aa11.05□□□□□ -0.64
CD44-203ENST00000278386 A0A087WUJ7 227 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 PRORSD1PA6NEY8 169 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 TPST1O60507 370 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 FZD7O75084 574 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 HPRP00739 348 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 HLA-HP01893 362 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 HLA-DOBP13765 273 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 B4GALT1P15291 398 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 SLC6A2P23975 617 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 APEX1P27695 318 aaKnown RBP11.04□□□□□ -0.64
CD44-203ENST00000278386 CHN2P52757 468 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 PMS2P3Q13401 168 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 CAMK2DQ13557 499 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 OR1Q1Q15612 314 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 PAGE3Q5JUK9 113 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 PHYHD1Q5SRE7 291 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 NET1Q7Z628 596 aaPredicted RBP11.04□□□□□ -0.64
CD44-203ENST00000278386 ARMC8Q8IUR7 673 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 CCDC36Q8IYA8 594 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 ZCCHC24Q8N2G6 241 aaKnown RBP11.04□□□□□ -0.64
CD44-203ENST00000278386 C10orf111Q8N326 155 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 OR6N1Q8NGY5 312 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 NEU4Q8WWR8 484 aaPredicted RBP11.04□□□□□ -0.64
CD44-203ENST00000278386 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 EBF4Q9BQW3 602 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 ULBP2Q9BZM5 246 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 MED29Q9NX70 200 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 ANGPT4Q9Y264 503 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 CMAHPQ9Y471 501 aa11.04□□□□□ -0.64
CD44-203ENST00000278386 A0A0B4J2E0 115 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 A0A1B0GX12 115 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 ZNF726A6NNF4 738 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 EVPLLA8MZ36 301 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 C11orf98E9PRG8 122 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 RAB36O95755 333 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 BGLAPP02818 100 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 IFNGR1P15260 489 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 AHCYP23526 432 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
CD44-203ENST00000278386 MRPL19P49406 292 aaKnown RBP11.03□□□□□ -0.64
CD44-203ENST00000278386 PIGFQ07326 219 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 PUDPQ08623 228 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 CCNIQ14094 377 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 CR1LQ2VPA4 569 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 TRMT5Q32P41 509 aaKnown RBP11.03□□□□□ -0.64
CD44-203ENST00000278386 AGKQ53H12 422 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 BLOC1S3Q6QNY0 202 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 SNX32Q86XE0 403 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 FUNDC1Q8IVP5 155 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 C20orf196Q8IYI0 205 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 SCAIQ8N9R8 606 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 HIPK4Q8NE63 616 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
CD44-203ENST00000278386 IL17RDQ8NFM7 739 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 MOGAT1Q96PD6 335 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 SNX18Q96RF0 628 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 SOX7Q9BT81 388 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 RSPO3Q9BXY4 272 aaPredicted RBP11.03□□□□□ -0.64
CD44-203ENST00000278386 IKZF5Q9H5V7 419 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 TMEM38AQ9H6F2 299 aa11.03□□□□□ -0.64
CD44-203ENST00000278386 SLCO1B3Q9NPD5 702 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms