RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 C10orf53Q8N6V4 93 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 MAPK1IP1LQ8NDC0 245 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
HMGN3-201ENST00000275036 RASSF5Q8WWW0 418 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 RADILQ96JH8 1075 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 ASPNQ9BXN1 380 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 ABCA1O95477 2261 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 IGHV1-18A0A0C4DH31 117 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 SLC35F4A4IF30 521 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 ATP6V1G2-DDX39BF2Z307 99 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 KPNA4O00629 521 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-201ENST00000275036 CH25HO95992 272 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 WNT11O96014 354 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 ACVR1BP36896 505 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 OR1E2P47887 323 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 SEC24CP53992 1094 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 ARF1P84077 181 aaKnown RBP12.58□□□□□ -0.4
HMGN3-201ENST00000275036 CLEC12BQ2HXU8 276 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-201ENST00000275036 CYBRD1Q53TN4 286 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 CARD17Q5XLA6 110 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 HMBOX1Q6NT76 420 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-201ENST00000275036 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 SLC15A3Q8IY34 581 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 MICU2Q8IYU8 434 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 OR2T12Q8NG77 320 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 OR5J2Q8NH18 312 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 PROX1Q92786 737 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 DHRS9Q9BPW9 319 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 CRLF2Q9HC73 371 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-201ENST00000275036 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 BAG5Q9UL15 447 aa12.58□□□□□ -0.4
HMGN3-201ENST00000275036 YLPM1P49750 1951 aaKnown RBP12.58□□□□□ -0.4
HMGN3-201ENST00000275036 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 C11orf98E9PRG8 122 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 M0R3G1 203 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 NME4O00746 187 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 SERPINI2O75830 405 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 SEC14L2O76054 403 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 ADORA3P0DMS8 318 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 FUT4P22083 530 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 AHCYP23526 432 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 KDELR2P33947 212 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 TTKP33981 857 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 PIN1Q13526 163 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 C8orf82Q6P1X6 216 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 ANKRD16Q6P6B7 361 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 DEF8Q6ZN54 512 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 SLC46A3Q7Z3Q1 461 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 SPATA21Q7Z572 469 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 PXKQ7Z7A4 578 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 MYPOPQ86VE0 399 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 C20orf196Q8IYI0 205 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 PIK3C3Q8NEB9 887 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 MAGEE2Q8TD90 523 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 HTRA1Q92743 480 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 GTPBP3Q969Y2 492 aaKnown RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 MPP4Q96JB8 637 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 ELAC2Q9BQ52 826 aaKnown RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 MYLK2Q9H1R3 596 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 FKRPQ9H9S5 495 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 TAS2R5Q9NYW4 299 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 CRNNQ9UBG3 495 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 MOKQ9UQ07 419 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 NOX1Q9Y5S8 564 aa12.57□□□□□ -0.4
HMGN3-201ENST00000275036 SONP18583 2426 aaKnown RBP12.57□□□□□ -0.4
HMGN3-201ENST00000275036 ELOVL7A1L3X0 281 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 AKAP8O43823 692 aaKnown RBP12.56□□□□□ -0.4
HMGN3-201ENST00000275036 CCDC22O60826 627 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 ASAH2BP0C7U1 165 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 UGT2B15P54855 530 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
HMGN3-201ENST00000275036 CAMK2DQ13557 499 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 AGAP6Q5VW22 663 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 MUC15Q8N387 334 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 PFN4Q8NHR9 129 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 TMEM255BQ8WV15 326 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 TRMT61AQ96FX7 289 aaKnown RBP12.56□□□□□ -0.4
HMGN3-201ENST00000275036 LRR1Q96L50 414 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 SLC38A2Q96QD8 506 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 CACNG6Q9BXT2 260 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 SLC19A3Q9BZV2 496 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 ALG2Q9H553 416 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 NANSQ9NR45 359 aa12.56□□□□□ -0.4
HMGN3-201ENST00000275036 FAIMQ9NVQ4 179 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms