RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF10P21506 573 aaPredicted RBP25.08■■□□□ 1.6
CBX4-201ENST00000269397 Q499Y3 187 aa25.08■■□□□ 1.6
CBX4-201ENST00000269397 MUC20Q8N307 709 aaPredicted RBP25.08■■□□□ 1.6
CBX4-201ENST00000269397 SCARB1Q8WTV0 552 aa25.08■■□□□ 1.6
CBX4-201ENST00000269397 PNPLA2Q96AD5 504 aa25.08■■□□□ 1.6
CBX4-201ENST00000269397 TMPRSS13Q9BYE2 586 aa25.08■■□□□ 1.6
CBX4-201ENST00000269397 SRA1Q9HD15 236 aaKnown RBP25.08■■□□□ 1.6
CBX4-201ENST00000269397 RABL2AQ9UBK7 228 aaPredicted RBP25.08■■□□□ 1.6
CBX4-201ENST00000269397 RABL2BQ9UNT1 228 aa25.08■■□□□ 1.6
CBX4-201ENST00000269397 TVP23AA6NH52 213 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 H7C1C5 153 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 GABRA1P14867 456 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 EFNB2P52799 333 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 DLX5P56178 289 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 LCN6P62502 163 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 ZCCHC12Q6PEW1 402 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 RERGQ96A58 199 aaPredicted RBP25.07■■□□□ 1.6
CBX4-201ENST00000269397 ANKRD9Q96BM1 317 aaPredicted RBP25.07■■□□□ 1.6
CBX4-201ENST00000269397 ADAD1Q96M93 576 aaKnown RBP25.07■■□□□ 1.6
CBX4-201ENST00000269397 CFHR5Q9BXR6 569 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 SLITRK2Q9H156 845 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 TMEM138Q9NPI0 162 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 MRM2Q9UI43 246 aaKnown RBP25.07■■□□□ 1.6
CBX4-201ENST00000269397 SPACA6W5XKT8 324 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 UBE2QL1A1L167 161 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 OR6C65A6NJZ3 312 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 CTNSO60931 367 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 GLSO94925 669 aaPredicted RBP25.07■■□□□ 1.6
CBX4-201ENST00000269397 SPDEFO95238 335 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 RASGRP1O95267 797 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 IGF2P01344 180 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 CALCBP10092 127 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 LSSP48449 732 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 SLC36A1Q7Z2H8 476 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 FBXW5Q969U6 566 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 SLC22A18Q96BI1 424 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 CTHRC1Q96CG8 243 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 NMNAT2Q9BZQ4 307 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 LYRM4Q9HD34 91 aa25.07■■□□□ 1.6
CBX4-201ENST00000269397 OR2W5A6NFC9 320 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 B3GALNT1O75752 331 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 CDC123O75794 336 aaPredicted RBP25.06■■□□□ 1.6
CBX4-201ENST00000269397 RBBP9O75884 186 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 GLCEO94923 617 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 ADH1BP00325 375 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 ANXA2P07355 339 aaKnown RBP25.06■■□□□ 1.6
CBX4-201ENST00000269397 AQP2P41181 271 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 ZNF684Q5T5D7 378 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 FAM122CQ6P4D5 195 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 GATSQ8NAP1 163 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 OR8S1Q8NH09 359 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 PATE1Q8WXA2 126 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 DVL3Q92997 716 aaPredicted RBP25.06■■□□□ 1.6
CBX4-201ENST00000269397 ZFYVE21Q9BQ24 234 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 CHST6Q9GZX3 395 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 A8MXK9 166 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 DCTN6O00399 190 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 FBXO45P0C2W1 286 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 ICAM2P13598 275 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 ADPRHP54922 357 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 GSG1LQ6UXU4 331 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 RTL10Q7L3V2 364 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 C10orf53Q8N6V4 93 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 RPS4Y2Q8TD47 263 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 MRPL48Q96GC5 212 aaKnown RBP25.06■■□□□ 1.6
CBX4-201ENST00000269397 SPACA7Q96KW9 195 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 UTP23Q9BRU9 249 aaKnown RBP25.06■■□□□ 1.6
CBX4-201ENST00000269397 ACTR10Q9NZ32 417 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 LRIT1Q9P2V4 623 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 GPR160Q9UJ42 338 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 IKZF2Q9UKS7 526 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 MOKQ9UQ07 419 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 RWDD3Q9Y3V2 267 aa25.06■■□□□ 1.6
CBX4-201ENST00000269397 HCRTR1O43613 425 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 CTSBP07858 339 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 IL10RAQ13651 578 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 RUNX3Q13761 415 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 RNF44Q7L0R7 432 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 LRRTM1Q86UE6 522 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 KCNJ13O60928 360 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 RDH16O75452 317 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 UPK3AO75631 287 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 MRPS10P82664 201 aaKnown RBP25.05■■□□□ 1.6
CBX4-201ENST00000269397 ALKBH1Q13686 389 aaKnown RBP25.05■■□□□ 1.6
CBX4-201ENST00000269397 RBMS2Q15434 407 aaKnown RBP25.05■■□□□ 1.6
CBX4-201ENST00000269397 C11orf88Q6PI97 169 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 SFTPA2Q8IWL1 248 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 CA13Q8N1Q1 262 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 RELL2Q8NC24 303 aaPredicted RBP25.05■■□□□ 1.6
CBX4-201ENST00000269397 OR51S1Q8NGJ8 323 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 STK35Q8TDR2 534 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 DNAJA3Q96EY1 480 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 AIFM2Q9BRQ8 373 aa25.05■■□□□ 1.6
CBX4-201ENST00000269397 KIAA0100Q14667 2235 aaKnown RBP25.04■■□□□ 1.6
CBX4-201ENST00000269397 F5H5P2 479 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 PPP3CBP16298 524 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 GPR18Q14330 331 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 FAM220AQ7Z4H9 259 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 OR2AK2Q8NG84 335 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 OR51D1Q8NGF3 324 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms