RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 BHLHE22Q8NFJ8 381 aaPredicted RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 OR6S1Q8NH40 331 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 C10orf105Q8TEF2 133 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 DYDC1Q8WWB3 177 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 CKAP2Q8WWK9 683 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 STON2Q8WXE9 905 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 GATAD2BQ8WXI9 593 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 NANOS1Q8WY41 292 aaKnown RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 FAM168AQ92567 244 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 FBXO17Q96EF6 278 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 TNFRSF13CQ96RJ3 184 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 ZNF607Q96SK3 696 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 CPPED1Q9BRF8 314 aaPredicted RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 TMEM27Q9HBJ8 222 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 GPR35Q9HC97 309 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 MOV10Q9HCE1 1003 aaKnown RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 CA10Q9NS85 328 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 INTS9Q9NV88 658 aaKnown RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 KLHL14Q9P2G3 628 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 NDUFAF1Q9Y375 327 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 CORINQ9Y5Q5 1042 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 ANK3Q12955 4377 aaKnown RBP8.45□□□□□ -1.06
VPS41-201ENST00000265745 M0QX08 132 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 TRAF3IP2O43734 574 aaPredicted RBP8.45□□□□□ -1.06
VPS41-201ENST00000265745 LY6HO94772 140 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 HPRP00739 348 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 IGKV3-15P01624 115 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 CRYAAP02489 173 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 OR4A8P0C604 315 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 CECR9P0C854 216 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 CBR1P16152 277 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 SLC25A16P16260 332 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 CBLP22681 906 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 CDH12P55289 794 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 PCBP3P57721 371 aaKnown RBP8.45□□□□□ -1.06
VPS41-201ENST00000265745 RGS8P57771 180 aaPredicted RBP8.45□□□□□ -1.06
VPS41-201ENST00000265745 DUSP7Q16829 419 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 TMEM249Q2WGJ8 235 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 PTOV1Q86YD1 416 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 ARMC8Q8IUR7 673 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 TMEM123Q8N131 208 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 GPR137CQ8N3F9 429 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 SMYD1Q8NB12 490 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 C11orf65Q8NCR3 313 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 PROX1Q92786 737 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 MAGEB18Q96M61 343 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 ANKRD27Q96NW4 1050 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 OR2M2Q96R28 347 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 EPYCQ99645 322 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 KCNS3Q9BQ31 491 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 ZNF385DQ9H6B1 395 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 EVA1AQ9H8M9 152 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 SEC61A2Q9H9S3 476 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 CRLF2Q9HC73 371 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 SELENONQ9NZV5 590 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 TESQ9UGI8 421 aaKnown RBP8.45□□□□□ -1.06
VPS41-201ENST00000265745 LEF1Q9UJU2 399 aaPredicted RBP8.45□□□□□ -1.06
VPS41-201ENST00000265745 SLC13A4Q9UKG4 626 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 COL6A5A8TX70 2615 aa8.45□□□□□ -1.06
VPS41-201ENST00000265745 ZNF503-AS2A6NEH8 195 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 A8MV72 311 aaPredicted RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 ZNF99A8MXY4 864 aaPredicted RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 HMGB1P1B2RPK0 211 aaPredicted RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 B9A039 149 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 FMO6PO60774 539 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 PDE5AO76074 875 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 BGLAPP02818 100 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 CSF3P09919 207 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 HLA-DOBP13765 273 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 NQO1P15559 274 aaKnown RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 CALCRP30988 508 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 NCALDP61601 193 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 VLDLRP98155 873 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 HGFACQ04756 655 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 RBBP4Q09028 425 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 PMS2P3Q13401 168 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 EFNB3Q15768 340 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 ADIPOQQ15848 244 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 CEACAM16Q2WEN9 425 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 PHYHD1Q5SRE7 291 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 LINC00114Q6XXX2 140 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 HDXQ7Z353 690 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 PXKQ7Z7A4 578 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 RANBP3LQ86VV4 465 aaPredicted RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 UEVLDQ8IX04 471 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 CCDC36Q8IYA8 594 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 C20orf196Q8IYI0 205 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 SCAIQ8N9R8 606 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 PIK3C3Q8NEB9 887 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 NUP37Q8NFH4 326 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 OR4F15Q8NGB8 312 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 TSPEARQ8WU66 669 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 TXNDC15Q96J42 360 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 LRR1Q96L50 414 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 MOGAT1Q96PD6 335 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 CGREF1Q99674 301 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms