RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C4orf46Q504U0 113 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 LIPNQ5VXI9 398 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 ULK3Q6PHR2 472 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 ATRAIDQ6UW56 229 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 FAM220AQ7Z4H9 259 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.93■□□□□ 0.14
TRAM1-201ENST00000262213 ZNF454Q8N9F8 522 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 OR51A4Q8NGJ6 313 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 OR51S1Q8NGJ8 323 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 RAB40AQ8WXH6 277 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 RERGQ96A58 199 aaPredicted RBP15.93■□□□□ 0.14
TRAM1-201ENST00000262213 SMIM10Q96HG1 83 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 ZNF426Q9BUY5 554 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 CHST6Q9GZX3 395 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 KLF15Q9UIH9 416 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 FBXL3Q9UKT7 428 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 DTX4Q9Y2E6 619 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 SPACA6W5XKT8 324 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 PPP3CBP16298 524 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 GJA4P35212 333 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 AQP2P41181 271 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 FNTBP49356 437 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 RPS21P63220 83 aaKnown RBP15.93■□□□□ 0.14
TRAM1-201ENST00000262213 STK35Q8TDR2 534 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 FAM3CQ92520 227 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 RELTQ969Z4 430 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 TM4SF19Q96DZ7 209 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 MRPL48Q96GC5 212 aaKnown RBP15.93■□□□□ 0.14
TRAM1-201ENST00000262213 ASB16Q96NS5 453 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 MFRPQ9BY79 579 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 MED11Q9P086 117 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 FRRS1LQ9P0K9 344 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 PILRAQ9UKJ1 303 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 MOKQ9UQ07 419 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 HEBP2Q9Y5Z4 205 aa15.93■□□□□ 0.14
TRAM1-201ENST00000262213 PCP4L1A6NKN8 68 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 SNRPGP15A8MWD9 76 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 TOR1AO14656 332 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 SULT1B1O43704 296 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 GLSO94925 669 aaPredicted RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 GPANK1O95872 356 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 PLATP00750 562 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 F13BP05160 661 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 GTF2F2P13984 249 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 ZNF10P21506 573 aaPredicted RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 PSG6Q00889 435 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 ILF3Q12906 894 aaKnown RBP eCLIP15.92■□□□□ 0.142e-7■■■■□ 25.7
TRAM1-201ENST00000262213 ZNF273Q14593 569 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 Q499Y3 187 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 OR51D1Q8NGF3 324 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 OR1E3Q8WZA6 343 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 RNF166Q96A37 237 aaPredicted RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 PNPLA2Q96AD5 504 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 FBXL21Q9UKT6 434 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 A0A087WV62 115 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 GMFGO60234 142 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 IL5P05113 134 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 RBM34P42696 430 aaKnown RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 FAM74A1Q5RGS3 127 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 JAZF1Q86VZ6 243 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 ESX1Q8N693 406 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 ZNF676Q8N7Q3 588 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 CAMKVQ8NCB2 501 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 OR2AK2Q8NG84 335 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 OR52H1Q8NGJ2 320 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 PATE1Q8WXA2 126 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 FGF13Q92913 245 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 SPACA7Q96KW9 195 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 RSPH9Q9H1X1 276 aaPredicted RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 LRIT1Q9P2V4 623 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 MRM2Q9UI43 246 aaKnown RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 GTF2A1LQ9UNN4 478 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 TRAV18A0A075B6X5 111 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 PRR19A6NJB7 356 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 KRBOX1C9JBD0 128 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 RDH16O75452 317 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 B3GALNT1O75752 331 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 TIMP1P01033 207 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 CCR4P51679 360 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 RBMS2Q15434 407 aaKnown RBP15.92■□□□□ 0.14
TRAM1-201ENST00000262213 DPY19L2P2Q6ZN68 376 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 C17orf107Q6ZR85 190 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 PDZD9Q8IXQ8 264 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 EID2Q8N6I1 236 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 BVESQ8NE79 360 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 FOXN4Q96NZ1 517 aa15.92■□□□□ 0.14
TRAM1-201ENST00000262213 H3BUI4 141 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 CYR61O00622 381 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 CTNSO60931 367 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 RLN2P04090 185 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 CALCBP10092 127 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 C5AR1P21730 350 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 DEFB110Q30KQ9 67 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 TANGO2Q6ICL3 276 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 SLC36A1Q7Z2H8 476 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 SFTPA2Q8IWL1 248 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 BOLLQ8N9W6 283 aaKnown RBP15.91■□□□□ 0.14
TRAM1-201ENST00000262213 DUSP19Q8WTR2 217 aa15.91■□□□□ 0.14
TRAM1-201ENST00000262213 ZNF578Q96N58 590 aaPredicted RBP15.91■□□□□ 0.14
TRAM1-201ENST00000262213 TMPRSS13Q9BYE2 586 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms