RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PPP2CAP67775 309 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 ZNF273Q14593 569 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 ETFDHQ16134 617 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 AGBL4Q5VU57 503 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 SLC22A10Q63ZE4 541 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 CTRB2Q6GPI1 263 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 RTL10Q7L3V2 364 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 OR9A4Q8NGU2 314 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 CASTOR1Q8WTX7 329 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 FAM46BQ96A09 425 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 MOGAT1Q96PD6 335 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 MFFQ9GZY8 342 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 ANKRD19PQ9H560 264 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 EVA1AQ9H8M9 152 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 PLEKHA6Q9Y2H5 1048 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 GPR31O00270 319 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 ERGP11308 486 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 SPI1P17947 270 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 MAOBP27338 520 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 S100A11P31949 105 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 LUMP51884 338 aaPredicted RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 COL19A1Q14993 1142 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 TAF13Q15543 124 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 MEP1BQ16820 701 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 RGS7BPQ6MZT1 257 aaPredicted RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 STAC2Q6ZMT1 411 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 RHOUQ7L0Q8 258 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 ZNF676Q8N7Q3 588 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 ADAD1Q96M93 576 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 RPP25Q9BUL9 199 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 DIABLOQ9NR28 239 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNX1-201ENST00000261889 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 DCDC2BA2VCK2 349 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 ZNF879B4DU55 563 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 SLC35G6P0C7Q6 338 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 CCKBRP32239 447 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 LSSP48449 732 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 C1QL3Q5VWW1 255 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 GSG1LQ6UXU4 331 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 CBLN2Q8IUK8 224 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 MRPL43Q8N983 215 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 CMBLQ96DG6 245 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 IGFLR1Q9H665 355 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 MED17Q9NVC6 651 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 LYARQ9NX58 379 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 NBEAQ8NFP9 2946 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 OIP5O43482 229 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 RNGTTO60942 597 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 ALOX12BO75342 701 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 ADH1CP00326 375 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 CA3P07451 260 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 CMPK1P30085 196 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 TNFRSF17Q02223 184 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 DPTQ07507 201 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 FHL1Q13642 323 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 MLC1Q15049 377 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 METTL11BQ5VVY1 283 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 OR1S1Q8NH92 325 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 LHFPL5Q8TAF8 219 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 LRRC46Q96FV0 321 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 TINAGL1Q9GZM7 467 aaPredicted RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
SNX1-201ENST00000261889 PHF11Q9UIL8 331 aa11.85□□□□□ -0.51
SNX1-201ENST00000261889 SDK2Q58EX2 2172 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ELOA3DA6NLF2 546 aaPredicted RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 DUXAA6NLW8 204 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 WNT11O96014 354 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 LTBQ06643 244 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 C1orf61Q13536 156 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 CST6Q15828 149 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ELOA3BQ3SY89 546 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 TOR1AIP2Q8NFQ8 470 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ELOA3Q8NG57 546 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 OR10K1Q8NGX5 313 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 TSEN15Q8WW01 171 aaKnown RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 FAM3CQ92520 227 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 NRSN2Q9GZP1 204 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 PCBD2Q9H0N5 130 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 LMAN2LQ9H0V9 348 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 KRCC1Q9NPI7 259 aaPredicted RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 TAS2R3Q9NYW6 316 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 CALML5Q9NZT1 146 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 OPN4Q9UHM6 478 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 DAPP1Q9UN19 280 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 LINC01387J3KSC0 135 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 CELA2BP08218 269 aaPredicted RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 PPP3CBP16298 524 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 BTG2P78543 158 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ZNF169Q14929 603 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms