RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 DOCK3Q8IZD9 2030 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 TRGV5A0A0B4J1U4 118 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 C21orf140B9A014 251 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 MTCP1P56278 107 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
CDH1-201ENST00000261769 CLN3Q13286 438 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 ZNF547Q8IVP9 402 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 ASCC1Q8N9N2 400 aaKnown RBP12.77□□□□□ -0.37
CDH1-201ENST00000261769 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 OR2A5Q96R48 311 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 ABCG5Q9H222 651 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 SPAARA0A1B0GVQ0 90 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 ZNF195O14628 629 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 IL2RGP31785 369 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 DSCR4P56555 118 aaPredicted RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 ACER2Q5QJU3 275 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 OLIG3Q7RTU3 272 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 OR4F15Q8NGB8 312 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 NUDT9Q9BW91 350 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 AMBRA1Q9C0C7 1298 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 UBAP1Q9NZ09 502 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 GMEB1Q9Y692 573 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 CTSVO60911 334 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 ETHE1O95571 254 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 SELEP16581 610 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 MRPS10P82664 201 aaKnown RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 DLEU7Q6UYE1 221 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 NPSR1Q6W5P4 371 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 SLC37A3Q8NCC5 494 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 APOBEC4Q8WW27 367 aaKnown RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 FAM210AQ96ND0 272 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 SORCS2Q96PQ0 1159 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 S1PR5Q9H228 398 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 UBQLN3Q9H347 655 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 USP22Q9UPT9 525 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 RHBDD3Q9Y3P4 386 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 SGCEO43556 437 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 CNOT4O95628 575 aaKnown RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 TP53P04637 393 aaPredicted RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 SFTPBP07988 381 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 MSR1P21757 451 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 PIGAP37287 484 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 KIR2DL3P43628 341 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 SYT14P1Q58G82 188 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 C22orf15Q8WYQ4 148 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 Q96M85 177 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 DOK2O60496 412 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 CELA2BP08218 269 aaPredicted RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 ARR3P36575 388 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 CD97P48960 835 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 ZNF691Q5VV52 312 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 PIAS4Q8N2W9 510 aaPredicted RBP12.76□□□□□ -0.37
CDH1-201ENST00000261769 ADAMTS14Q8WXS8 1223 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 SPNS1Q9H2V7 528 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 FSCN3Q9NQT6 498 aa12.76□□□□□ -0.37
CDH1-201ENST00000261769 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 PATE3B3GLJ2 98 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 SLC34A2O95436 690 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 AMY2AP04746 511 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 ATP1B1P05026 303 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 ALPLP05186 524 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 DUSP7Q16829 419 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 EMC4Q5J8M3 183 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 KIF18BQ86Y91 864 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 GLB1L2Q8IW92 636 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 GALNT16Q8N428 558 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 OR2V1Q8NHB1 315 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 OXGR1Q96P68 337 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 KCNN3Q9UGI6 736 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 ARID1BQ8NFD5 2236 aaPredicted RBP12.75□□□□□ -0.37
CDH1-201ENST00000261769 A0A1W2PPH5 198 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 NKX6-3A6NJ46 265 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 CYB5BO43169 146 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 CBX7O95931 251 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 SFTPCP11686 197 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 SLC14A1Q13336 389 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 MAB21L1Q13394 359 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 PRSS42Q7Z5A4 293 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 LINC01555Q8NAE3 123 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 SLC7A13Q8TCU3 470 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 SCGB1C1Q8TD33 95 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 ZNF700Q9H0M5 742 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 ZFP57Q9NU63 452 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 C14orf119Q9NWQ9 140 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 A0A1W2PNR3 127 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 SLC33A1O00400 549 aaPredicted RBP12.75□□□□□ -0.37
CDH1-201ENST00000261769 FCMRO60667 390 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 GLCEO94923 617 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 IGHV3-9P01782 118 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 UBCP0CG48 685 aaKnown RBP12.75□□□□□ -0.37
CDH1-201ENST00000261769 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 MLLT11Q13015 90 aaPredicted RBP12.75□□□□□ -0.37
CDH1-201ENST00000261769 FGFBP1Q14512 234 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms