RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CREB3L2Q70SY1 520 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 FAM122BQ7Z309 247 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 WDFY1Q8IWB7 410 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 TUSC5Q8IXB3 177 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 ZIC4Q8N9L1 334 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 OR2T33Q8NG76 320 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 TXNDC15Q96J42 360 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF570Q96NI8 536 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF385AQ96PM9 386 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 TSPAN32Q96QS1 320 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 TTYH2Q9BSA4 534 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 POLDIP3Q9BY77 421 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 GRIP2Q9C0E4 1043 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 MED29Q9NX70 200 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF346Q9UL40 294 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 OSGIN2Q9Y236 505 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 IER3IP1Q9Y5U9 82 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 FLVCR1Q9Y5Y0 555 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 ALPK2Q86TB3 2170 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 FAM208BQ5VWN6 2430 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 TRGV8A0A0C4DH27 118 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 ZAR1LA6NP61 321 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 NTF4P34130 210 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 CDK5Q00535 292 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 TOP3AQ13472 1001 aaPredicted RBP14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 MELKQ14680 651 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 EEF1A1P5Q5VTE0 462 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 ACSM5Q6NUN0 579 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC27A4Q6P1M0 643 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC35D2Q76EJ3 337 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 GCNT2Q8N0V5 402 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 MARVELD2Q8N4S9 558 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 NDEL1Q9GZM8 345 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 BCO1Q9HAY6 547 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 MED12LQ86YW9 2145 aa14.05□□□□□ -0.16
CCDC90B-201ENST00000260054 A0A1W2PRG6 482 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 E9PQ18 207 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 IGHMP01871 453 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 RPSAP08865 295 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GLI4P10075 376 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 CA7P43166 264 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GUSBP1Q15486 140 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GTF2IRD2BQ6EKJ0 949 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 NCCRP1Q6ZVX7 275 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GTF2IRD2Q86UP8 949 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 MCEMP1Q8IX19 187 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 LNX2Q8N448 690 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GALNT11Q8NCW6 608 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 Q96M85 177 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 ERMAPQ96PL5 475 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 TM9SF2Q99805 663 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 EMC6Q9BV81 110 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 TXNIPQ9H3M7 391 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC25A19Q9HC21 320 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 FAM118AQ9NWS6 357 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 DOCK7Q96N67 2140 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 TEX13CA0A0J9YWL9 993 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 NPIPB13A6NJU9 1138 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF724A8MTY0 619 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 NPIPB4C9JG80 1138 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 H0YJX3 145 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 ARPC3O15145 178 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 BCL10O95999 233 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 YES1P07947 543 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 STSP08842 583 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 APEHP13798 732 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 SDHAP31040 664 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 UQCRFS1P47985 274 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 RPS6KA3P51812 740 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 CASP6P55212 293 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 CLDN17P56750 224 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 RPL27P61353 136 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 ARMC4Q5T2S8 1044 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 NAXEQ8NCW5 288 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF519Q8TB69 540 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 INTS12Q96CB8 462 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 RASD2Q96D21 266 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GMPPAQ96IJ6 420 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 GP6Q9HCN6 339 aa14.04□□□□□ -0.16
CCDC90B-201ENST00000260054 RELNP78509 3460 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 ARHGAP21Q5T5U3 1957 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 EIF4E1BA6NMX2 242 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 GPR171O14626 319 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 SS18L1O75177 396 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 TXNDC12O95881 172 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 GNLYP22749 145 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 AGTR1P30556 359 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 TIMP3P35625 211 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 DAP3P51398 398 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 SMSP52788 366 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 BIDP55957 195 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 MYBPC1Q00872 1141 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 RUNX1T1Q06455 604 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 FOXF2Q12947 444 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 MESTQ5EB52 335 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC35F1Q5T1Q4 408 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 SLX4IPQ5VYV7 408 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 OR2A2Q6IF42 318 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 ASB10Q8WXI3 467 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms