RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 MAN2B1O00754 1011 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 IMPA2O14732 288 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 PLPP2O43688 288 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 ZFPL1O95159 310 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 TXNDC12O95881 172 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 CSTAP01040 98 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 CSF1P09603 554 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 NQO2P16083 231 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 C2orf68Q2NKX9 166 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 ZNF660Q6AZW8 331 aaPredicted RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 MRM1Q6IN84 353 aaKnown RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 LCTLQ6UWM7 567 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 TMEM200AQ86VY9 491 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 PUSL1Q8N0Z8 303 aaKnown RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 METTL27Q8N6F8 245 aaPredicted RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 OR14C36Q8NHC7 312 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 PHOSPHO1Q8TCT1 267 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 C15orf40Q8WUR7 153 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 STARD5Q9NSY2 213 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 FAM86C1Q9NVL1 165 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 GRHPRQ9UBQ7 328 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 CA5BQ9Y2D0 317 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 CENPVL1A0A0U1RR11 272 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 PLSCR5A0PG75 271 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 MCIDASD6RGH6 385 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 TMEM189-UBE2V1I3L0A0 370 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 SULT1C2O00338 296 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 MED6O75586 246 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 SLC25A12O75746 678 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 HTR3BO95264 441 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 PAPLNO95428 1278 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 KNG1P01042 644 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 RAB40ALP0C0E4 278 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 ZNF888P0CJ79 500 aaPredicted RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 OR3A2P47893 321 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 RAB11BQ15907 218 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 ZNF793Q6ZN11 406 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 STX12Q86Y82 276 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 OR2L3Q8NG85 312 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 RAB40AQ8WXH6 277 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 CASD1Q96PB1 797 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 GAL3ST4Q96RP7 486 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 ELF4Q99607 663 aaPredicted RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 WDR77Q9BQA1 342 aaPredicted RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
USP30-201ENST00000257548 SRMSQ9H3Y6 488 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 IL21RQ9HBE5 538 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 HS3ST2Q9Y278 367 aa11.33□□□□□ -0.6
USP30-201ENST00000257548 AKR7A3O95154 331 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 HOXB5P09067 269 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 CYBAP13498 195 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 RAB2AP61019 212 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 ILF3Q12906 894 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP30-201ENST00000257548 BAMBIQ13145 260 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 CDKN3Q16667 212 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 TPGS2Q68CL5 300 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 VN1R2Q8NFZ6 395 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OR7G2Q8NG99 324 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OR1J2Q8NGS2 313 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 SFT2D1Q8WV19 159 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 MYADMQ96S97 322 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 SGPP1Q9BX95 441 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 PIGMQ9H3S5 423 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 A0A0D9SG52 128 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 NDUFB6O95139 128 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OR4E1P0C645 316 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 DAOP14920 347 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 SNRPNP63162 240 aaKnown RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 CSNK1G2P78368 415 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 SHC2P98077 582 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 EBPQ15125 230 aaKnown RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 DCST2Q5T1A1 773 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OR1S1Q8NH92 325 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OR14A16Q8NHC5 309 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OVCA2Q8WZ82 227 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 DTD2Q96FN9 168 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OR5V1Q9UGF6 321 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 NDOR1Q9UHB4 597 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 A0A0A6YYC8 382 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 I3L1I5 382 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 OR2T7P0C7T2 308 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 ZNF10P21506 573 aaPredicted RBP11.32□□□□□ -0.6
USP30-201ENST00000257548 ACTBP60709 375 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 ACTG1P63261 375 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 POU4F2Q12837 409 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 ZNF626Q68DY1 528 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 OOSP2Q86WS3 158 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms