RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 TEX19Q8NA77 164 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 CCNL2Q96S94 520 aaPredicted RBP16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 COL25A1Q9BXS0 654 aaPredicted RBP16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 SEMA5BQ9P283 1151 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 FAM240BA0A1B0GVZ2 78 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 A0A1W2PQM1 296 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 HMX3A6NHT5 357 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 ACOD1A6NK06 481 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 SERPINA3P01011 423 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 OR8G3PP0DMU2 310 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 CCL7P80098 99 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 TATDN3Q17R31 274 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 RNASE12Q5GAN4 147 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 PAMR1Q6UXH9 720 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 OR1N1Q8NGS0 311 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 DAZLQ92904 295 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 SLC25A18Q9H1K4 315 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 SLC22A11Q9NSA0 550 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 GRHPRQ9UBQ7 328 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 COPS7AQ9UBW8 275 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 FER1L5A0AVI2 2057 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 EEF1E1O43324 174 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 FZD7O75084 574 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 SYPP08247 313 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 UCHL1P09936 223 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 EPXP11678 715 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 RBMS1P29558 406 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 PITPNBP48739 271 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 AGFG1P52594 562 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 IFITM2Q01629 132 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 SF3B4Q15427 424 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 MZT2BQ6NZ67 158 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC7A6Q92536 515 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 RGP1Q92546 391 aaPredicted RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 TRIM63Q969Q1 353 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 FYTTD1Q96QD9 318 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 THAP7Q9BT49 309 aaPredicted RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 TBL1XR1Q9BZK7 514 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 RANGRFQ9HD47 186 aaPredicted RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 NOX4Q9NPH5 578 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 R4GN57 208 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 TRAV1-2A0A0B4J238 106 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 C11orf98E9PRG8 122 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 PIN1P1O15428 100 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 FLRT2O43155 660 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 IGF2P01344 180 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 DDOSTP39656 456 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 IL10RAQ13651 578 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 SF3A2Q15428 464 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF684Q5T5D7 378 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 TCEAL6Q6IPX3 200 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 OR6V1Q8N148 313 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 SCAIQ8N9R8 606 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 TCEAL3Q969E4 200 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 ZC3HAV1LQ96H79 300 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 TSPAN10Q9H1Z9 355 aaPredicted RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF768Q9H5H4 540 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 BRD7Q9NPI1 651 aa16.95■□□□□ 0.3
PDLIM4-201ENST00000253754 NOTOA8MTQ0 251 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ZFPL1O95159 310 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 PLGP00747 810 aaPredicted RBP16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 CXCR1P25024 350 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SRP9P49458 86 aaKnown RBP16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC25A1P53007 311 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 RAB25P57735 213 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 DCAF7P61962 342 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 COX15Q7KZN9 410 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC29A4Q7RTT9 530 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 KMT5CQ86Y97 462 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 C7orf57Q8NEG2 295 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC25A36Q96CQ1 311 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 DERL3Q96Q80 235 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 CTRCQ99895 268 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SYT4Q9H2B2 425 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ARRDC1-AS1Q9H2J1 176 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 TP63Q9H3D4 680 aaPredicted RBP16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ALG5Q9Y673 324 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ALG1L2C9J202 215 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ARL6IP5O75915 188 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC6A8P48029 635 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 GPR176Q14439 515 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ZFP69Q49AA0 526 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 HSD17B12Q53GQ0 312 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 TIGD4Q8IY51 512 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC38A9Q8NBW4 561 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 DUSP18Q8NEJ0 188 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 OIT3Q8WWZ8 545 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 NAT6Q93015 286 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 RFT1Q96AA3 541 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 FOXN4Q96NZ1 517 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 GFI1Q99684 422 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 WDR76Q9H967 626 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 ING1Q9UK53 422 aaPredicted RBP16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 NPFFR2Q9Y5X5 522 aa16.94■□□□□ 0.3
PDLIM4-201ENST00000253754 EP300Q09472 2414 aaPredicted RBP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 A0A1B0GTH9 108 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 BGLAPP02818 100 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 HIST1H2ABP04908 130 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 APEHP13798 732 aaKnown RBP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 MPLP40238 635 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms