RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 NDUFAF7Q7L592 441 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 LRRC75AQ8NAA5 344 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ZNF511Q8NB15 262 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 OR2T27Q8NH04 317 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 FBXW5Q969U6 566 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 NKX2-4Q9H2Z4 354 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 POMT2Q9UKY4 750 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 TRABD2BA6NFA1 517 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 OR10H2O60403 315 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 IFI6P09912 130 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 TMIGD3P0DMS9 266 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 RPS27P42677 84 aaKnown RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 IGLV3-21P80748 117 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 DMWDQ09019 674 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 HTR4Q13639 388 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 FZD2Q14332 565 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 PRTGQ2VWP7 1150 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 FNDC7Q5VTL7 733 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 MS4A15Q8N5U1 240 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ZNF615Q8N8J6 731 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ST8SIA4Q92187 359 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 SFXN2Q96NB2 322 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 GPANK1O95872 356 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 SRMP19623 302 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 POU3F2P20265 443 aaPredicted RBP9.21□□□□□ -0.93
COPB1-201ENST00000249923 SELENOPP49908 381 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 C4orf46Q504U0 113 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 BIVMQ86UB2 503 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 SMIM4Q8WVI0 70 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 Q96M85 177 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 TRIM2Q9C040 744 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 KLK11Q9UBX7 282 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 MLXQ9UH92 298 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 FBXL2Q9UKC9 423 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 NUP50Q9UKX7 468 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 ERVK-19Q9WJR5 959 aa9.21□□□□□ -0.93
COPB1-201ENST00000249923 TCRBV21S2A2A0A5A6 115 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 GPR171O14626 319 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 FLRT2O43155 660 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 MPC2O95563 127 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 RAF1P04049 648 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 ANXA7P20073 488 aaKnown RBP9.21□□□□□ -0.94
COPB1-201ENST00000249923 M6PRP20645 277 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 ILF3Q12906 894 aaKnown RBP eCLIP9.21□□□□□ -0.94
COPB1-201ENST00000249923 TDGQ13569 410 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 TCTE1Q5JU00 501 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 FAM74A1Q5RGS3 127 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 TMEM88Q6PEY1 159 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 Q6ZTK2 550 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 SLITRK4Q8IW52 837 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 OR52B4Q8NGK2 314 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 PMM1Q92871 262 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 GPR27Q9NS67 375 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 FKBP7Q9Y680 259 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 H7C1C5 153 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 UPK3AO75631 287 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 ABHD16AO95870 558 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 CSRP1P21291 193 aaKnown RBP9.21□□□□□ -0.94
COPB1-201ENST00000249923 EDNRAP25101 427 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 GDNFP39905 211 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 AQP2P41181 271 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 GABRA4P48169 554 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 PTH2RP49190 550 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 LCN6P62502 163 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 POU4F2Q12837 409 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 CAMK2DQ13557 499 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 MELKQ14680 651 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 CSRP2Q16527 193 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 KLHL26Q53HC5 615 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 MANEAQ5SRI9 462 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 POMGNT2Q8NAT1 580 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 FAM71CQ8NEG0 241 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 DNAAF1Q8NEP3 725 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 OR51A4Q8NGJ6 313 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 OR10AC1Q8NH08 325 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 RBPMSQ93062 196 aaKnown RBP9.21□□□□□ -0.94
COPB1-201ENST00000249923 SGTBQ96EQ0 304 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 HSPA12BQ96MM6 686 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 LINC00052Q96N35 136 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 MFRPQ9BY79 579 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 FBXL21Q9UKT6 434 aa9.21□□□□□ -0.94
COPB1-201ENST00000249923 ELF5Q9UKW6 265 aaPredicted RBP9.21□□□□□ -0.94
COPB1-201ENST00000249923 SERINC4A6NH21 518 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 TOR1AO14656 332 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 GSTZ1O43708 216 aaPredicted RBP9.2□□□□□ -0.94
COPB1-201ENST00000249923 DOK2O60496 412 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 SULT1A3P0DMM9 295 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 SULT1A4P0DMN0 295 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 HHEXQ03014 270 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 C19orf57Q0VDD7 668 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 AANATQ16613 207 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 LGALSLQ3ZCW2 172 aaPredicted RBP9.2□□□□□ -0.94
COPB1-201ENST00000249923 SLC6A19Q695T7 634 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 RPL22L1Q6P5R6 122 aaKnown RBP9.2□□□□□ -0.94
COPB1-201ENST00000249923 CMIPQ8IY22 773 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 C19orf47Q8N9M1 422 aaKnown RBP9.2□□□□□ -0.94
COPB1-201ENST00000249923 OR2T4Q8NH00 348 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 OR52I2Q8NH67 350 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 CPNE2Q96FN4 548 aaPredicted RBP9.2□□□□□ -0.94
COPB1-201ENST00000249923 MRM2Q9UI43 246 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms