RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 RSBN1Q5VWQ0 802 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-201ENST00000238497 C1QL3Q5VWW1 255 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 CEACAM19Q7Z692 300 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 LYSMD2Q8IV50 215 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 CADM3Q8N126 398 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 RFLNBQ8N5W9 214 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 MOSPD2Q8NHP6 518 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 SMPDL3BQ92485 455 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 PTP4A1Q93096 173 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 SGTBQ96EQ0 304 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 SIGLEC11Q96RL6 698 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 COPS7AQ9UBW8 275 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 ARID1AO14497 2285 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 BSNQ9UPA5 3926 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 A0A0B4J203 849 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 ARRDC5A6NEK1 342 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 SERINC4A6NH21 518 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 ARHGEF9O43307 516 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 UPK1BO75841 260 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 CEACAM4O75871 244 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 SULT1C4O75897 302 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 SERPINA7P05543 415 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 TBXA2RP21731 343 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 PLCXD2Q0VAA5 305 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 MLLT11Q13015 90 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-201ENST00000238497 TOMM34Q15785 309 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-201ENST00000238497 LEG1Q6P5S2 330 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 ZNF595Q8IYB9 648 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 DUSP19Q8WTR2 217 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 NEDD4LQ96PU5 975 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 G6PC3Q9BUM1 346 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 TRIM2Q9C040 744 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 FKBP14Q9NWM8 211 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 ASB6Q9NWX5 421 aa7.85□□□□□ -1.15
VPS4B-201ENST00000238497 TEX13CA0A0J9YWL9 993 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 GABRPO00591 440 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SELENOFO60613 162 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 IFNGP01579 166 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 PEPDP12955 493 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 ICAM2P13598 275 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 CXCR1P25024 350 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS4B-201ENST00000238497 IRF3Q14653 427 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 PON3Q15166 354 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 FHL5Q5TD97 284 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 DDI2Q5TDH0 399 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 MEPCEQ7L2J0 689 aaKnown RBP7.84□□□□□ -1.15
VPS4B-201ENST00000238497 C19orf18Q8NEA5 215 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 CHPT1Q8WUD6 406 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 VMP1Q96GC9 406 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 DHRS1Q96LJ7 313 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 PDCD1LG2Q9BQ51 273 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SH3BGRL2Q9UJC5 107 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SIGLEC7Q9Y286 467 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 EXOSC1Q9Y3B2 195 aaKnown RBP7.84□□□□□ -1.15
VPS4B-201ENST00000238497 CMAHPQ9Y471 501 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 A0A087WV62 115 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 IGHV1-45A0A0A0MS14 117 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 A1L4Q6 167 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SHISA8B8ZZ34 492 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 H3BML4 177 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 ICOSLGO75144 302 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 NKX2-2O95096 273 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 UTS2O95399 124 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 TACR3P29371 465 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SLC6A6P31641 620 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 OR10A3P58181 314 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 BAK1Q16611 211 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 TRIQKQ629K1 86 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 ULK3Q6PHR2 472 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 APOOLQ6UXV4 268 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 NRARPQ7Z6K4 114 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 GLCCI1Q86VQ1 547 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 JAZF1Q86VZ6 243 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 ZNF671Q8TAW3 534 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SLC2A12Q8TD20 617 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 THEM6Q8WUY1 208 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 WACQ9BTA9 647 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 OR11A1Q9GZK7 315 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 DNAJB12Q9NXW2 375 aaKnown RBP7.84□□□□□ -1.15
VPS4B-201ENST00000238497 ABI3Q9P2A4 366 aa7.84□□□□□ -1.15
VPS4B-201ENST00000238497 SIRT4Q9Y6E7 314 aaPredicted RBP7.84□□□□□ -1.15
VPS4B-201ENST00000238497 IGLV3-12A0A075B6K2 115 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 SLITRK5O94991 958 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 OR6A2O95222 327 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 HLA-DPB1P04440 258 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 THBS1P07996 1170 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 EDNRAP25101 427 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 FXYD6P3P58550 94 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 TOMM20Q15388 145 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 NXNL2Q5VZ03 156 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 FAM180AQ6UWF9 173 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF550Q7Z398 422 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 IZUMO1Q8IYV9 350 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 Q8NA96 180 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 DRAXINQ8NBI3 349 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 OR5W2Q8NH69 310 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ZPLD1Q8TCW7 415 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF764Q96H86 408 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 VSTM2LQ96N03 204 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms