RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 KMT5CQ86Y97 462 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 FAM109AQ8N4B1 249 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 LGALS14Q8TCE9 139 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 CCDC86Q9H6F5 360 aaKnown RBP20.19■□□□□ 0.82
CCDC9-201ENST00000221922 COPS3Q9UNS2 423 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 COLQQ9Y215 455 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-201ENST00000221922 HIF3AQ9Y2N7 669 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 NOS1APO75052 506 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-201ENST00000221922 IGKV3-11P04433 115 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 SULT1A3P0DMM9 295 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 SULT1A4P0DMN0 295 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ERVK-25P63136 954 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 IKZF1Q13422 519 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ELAVL1Q15717 326 aaKnown RBP20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF74Q16587 644 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF321PQ8N8H1 164 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 OR11H4Q8NGC9 324 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 OR56B4Q8NH76 319 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 CDX2Q99626 313 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-201ENST00000221922 PDCD1LG2Q9BQ51 273 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 C12orf10Q9HB07 376 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 OR6C68A6NDL8 312 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 A8MUA0 341 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 SRMP19623 302 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 SLC6A8P48029 635 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ST3GAL2Q16842 350 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 WDR74Q6RFH5 385 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-201ENST00000221922 FGD2Q7Z6J4 655 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 LUZP2Q86TE4 346 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 TIGD4Q8IY51 512 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 CMTM4Q8IZR5 234 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 C10orf53Q8N6V4 93 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF671Q8TAW3 534 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-201ENST00000221922 TSLPQ969D9 159 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 RASD2Q96D21 266 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 PLEKHA1Q9HB21 404 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 NANSQ9NR45 359 aa20.18■□□□□ 0.82
CCDC9-201ENST00000221922 MEIKINA0A087WXM9 373 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 A0A1B0GVI7 797 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 GPR171O14626 319 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 PIN1P1O15428 100 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 OIP5O43482 229 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 NDUFB5O43674 189 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 GLCEO94923 617 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 MT-ND4P03905 459 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 TPOP07202 933 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ATXN8OSP0DMR3 200 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ZP2Q05996 745 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 DMWDQ09019 674 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 TEX261Q6UWH6 196 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 PRSS45Q7RTY3 260 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 NUP54Q7Z3B4 507 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 OR8H1Q8NGG4 311 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 GFI1Q99684 422 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ANKRD10Q9NXR5 420 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 DHCR7Q9UBM7 475 aaKnown RBP20.17■□□□□ 0.82
CCDC9-201ENST00000221922 SIT1Q9Y3P8 196 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 U3KQ87 197 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF593O00488 134 aaPredicted RBP20.17■□□□□ 0.82
CCDC9-201ENST00000221922 IMPA2O14732 288 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 SELENOFO60613 162 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 TMEM127O75204 238 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 DDAH2O95865 285 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 DCNP07585 359 aaKnown RBP20.17■□□□□ 0.82
CCDC9-201ENST00000221922 CD14P08571 375 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 FOLR1P15328 257 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 GXYLT1Q4G148 440 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 YOD1Q5VVQ6 348 aaPredicted RBP20.17■□□□□ 0.82
CCDC9-201ENST00000221922 FAM199XQ6PEV8 388 aaPredicted RBP20.17■□□□□ 0.82
CCDC9-201ENST00000221922 JAZF1Q86VZ6 243 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 OR6K6Q8NGW6 343 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 MOSPD2Q8NHP6 518 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF721Q8TF20 911 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 GIMAP1Q8WWP7 306 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ADIPOR1Q96A54 375 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 DERL3Q96Q80 235 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 LAT2Q9GZY6 243 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 MMP25Q9NPA2 562 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 NOX4Q9NPH5 578 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 EMC3Q9P0I2 261 aa20.17■□□□□ 0.82
CCDC9-201ENST00000221922 ADAMTS20P59510 1910 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-201ENST00000221922 BLOC1S5-TXNDC5H3BN57 136 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 PRKNO60260 465 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-201ENST00000221922 GDNFP39905 211 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 SLC25A1P53007 311 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 ESCO2Q56NI9 601 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 LEG1Q6P5S2 330 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 CBLN3Q6UW01 205 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 SMAD5Q99717 465 aaKnown RBP20.16■□□□□ 0.82
CCDC9-201ENST00000221922 AUNIPQ9H7T9 357 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 HEXA-AS1Q9H8Q6 139 aa20.16■□□□□ 0.82
CCDC9-201ENST00000221922 LEUTXA8MZ59 168 aa20.15■□□□□ 0.82
CCDC9-201ENST00000221922 AIPO00170 330 aa20.15■□□□□ 0.82
CCDC9-201ENST00000221922 PDCD5O14737 125 aa20.15■□□□□ 0.82
CCDC9-201ENST00000221922 TSC22D2O75157 780 aa20.15■□□□□ 0.82
CCDC9-201ENST00000221922 RAF1P04049 648 aa20.15■□□□□ 0.82
CCDC9-201ENST00000221922 FBLP22087 321 aaKnown RBP20.15■□□□□ 0.82
CCDC9-201ENST00000221922 PSMB10P40306 273 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms