RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ZNF749O43361 778 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 AMY2AP04746 511 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 MSL3P1P0C860 447 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 LSSP48449 732 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 ZNF136P52737 540 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 FZD2Q14332 565 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 METTL11BQ5VVY1 283 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 ELMOD2Q8IZ81 293 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 PCNPQ8WW12 178 aaKnown RBP11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 MR1Q95460 341 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 ELMOD3Q96FG2 381 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 OR2M2Q96R28 347 aa11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 METTL17Q9H7H0 456 aaPredicted RBP11.31□□□□□ -0.6
TM9SF4-201ENST00000217315 PTPRZ1P23471 2315 aaPredicted RBP11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 UQCRC1P31930 480 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 EFR3AQ14156 821 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 NKPD1Q17RQ9 610 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 CDNFQ49AH0 187 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 UBE2NLQ5JXB2 153 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 HEPHL1Q6MZM0 1159 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 KCTD9Q7L273 389 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 OR51D1Q8NGF3 324 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 OR5L2Q8NGL0 311 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 WDR76Q9H967 626 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 ALDOBP05062 364 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 MYF5P13349 255 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 VEGFCP49767 419 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 CCR5P51681 352 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 PSG6Q00889 435 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 RPL18Q07020 188 aaKnown RBP11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 FAM53BQ14153 422 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 GPBAR1Q8TDU6 330 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 FAM46BQ96A09 425 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 PELI1Q96FA3 418 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 C10orf90Q96M02 699 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 DNAJB12Q9NXW2 375 aaKnown RBP11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 TAS2R8Q9NYW2 309 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 TMED7-TICAM2A0A0A6YYA0 188 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 C13orf42A0A1B0GVH6 325 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 PEX14O75381 377 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 SYPP08247 313 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 RAB40ALP0C0E4 278 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 PTBP1P26599 531 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■■□□□ 13
TM9SF4-201ENST00000217315 MAGEB1P43366 347 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 DCAF7P61962 342 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 C14orf28Q4W4Y0 310 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 SLC25A30Q5SVS4 291 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 RAB40AQ8WXH6 277 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 MEPEQ9NQ76 525 aaPredicted RBP11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 RPH3AQ9Y2J0 694 aaPredicted RBP11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 TMED7Q9Y3B3 224 aa11.3□□□□□ -0.6
TM9SF4-201ENST00000217315 CYR61O00622 381 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 BCAT2O15382 392 aaPredicted RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ARPC5O15511 151 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 FXYD6P3P58550 94 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 SLC35D3Q5M8T2 416 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 FAM69AQ5T7M9 428 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 NDUFAF7Q7L592 441 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 COQ8AQ8NI60 647 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 OR1F2PQ96R84 312 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 SIGLEC11Q96RL6 698 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 C7orf50Q9BRJ6 194 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 AICDAQ9GZX7 198 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 CYSLTR2Q9NS75 346 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 FLRT3Q9NZU0 649 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 UBQLN2Q9UHD9 624 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 EXOGQ9Y2C4 368 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ASXL3Q9C0F0 2248 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 A0A087WUJ7 227 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ICOSLGO75144 302 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 PPICP45877 212 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 SLC16A9Q7RTY1 509 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 SYS1Q8N2H4 156 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 PNLDC1Q8NA58 520 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 MSANTD3Q96H12 275 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 MRI1Q9BV20 369 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 EVA1BQ9NVM1 165 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 HHLA2Q9UM44 414 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 MMACHCQ9Y4U1 282 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 IDSB3KWA1 339 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 KDM4BO94953 1096 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 EPXP11678 715 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ARPC4P59998 168 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ACY1Q03154 408 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ELAVL1Q15717 326 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 HACD4Q5VWC8 232 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 OR7G1Q8NGA0 311 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms