RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ATP13A2Q9NQ11 1180 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 EXOSC3Q9NQT5 275 aaKnown RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 MBD2Q9UBB5 411 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 RPS6KB2Q9UBS0 482 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 IL19Q9UHD0 177 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 SSR3Q9UNL2 185 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 PEX16Q9Y5Y5 336 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 MPDZO75970 2070 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 FRG2CA6NGY1 282 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 TRIM77I1YAP6 450 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 CH25HO95992 272 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 FBLP22087 321 aaKnown RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 RORAP35398 523 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 ETV6P41212 452 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 SLC1A3P43003 542 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 RFX3P48380 749 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 ARRB1P49407 418 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 SOX8P57073 446 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 GNG2P59768 71 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 PCGF3Q3KNV8 242 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 SOWAHCQ53LP3 525 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 ALG10BQ5I7T1 473 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 KANSL1Q7Z3B3 1105 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 MRPL41Q8IXM3 137 aaKnown RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 GPR135Q8IZ08 494 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 ASCC1Q8N9N2 400 aaKnown RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 OR13C2Q8NGS9 318 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 GRHL3Q8TE85 626 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 SENP5Q96HI0 755 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 SERTAD3Q9UJW9 196 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 MRTO4Q9UKD2 239 aaKnown RBP9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 RP1P56715 2156 aa9.66□□□□□ -0.86
APOBEC3D-201ENST00000216099 ADAM11O75078 769 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 CSTAP01040 98 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 IGKV3-11P04433 115 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 KRT8P05787 483 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 DCNP07585 359 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SLC6A6P31641 620 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 CASP3P42574 277 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SLC9A3P48764 834 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 ZNF45Q02386 682 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 PLK5Q496M5 336 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 RSBN1Q5VWQ0 802 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 KIRREL2Q6UWL6 708 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 MEPCEQ7L2J0 689 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 KLHL36Q8N4N3 616 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 OR52M1Q8NGK5 317 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 ZNF649Q9BS31 505 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 ASPNQ9BXN1 380 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SLC19A3Q9BZV2 496 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 RNF167Q9H6Y7 350 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 UBQLN4Q9NRR5 601 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 INPP5EQ9NRR6 644 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 MAU2Q9Y6X3 613 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SPTBN5Q9NRC6 3674 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 A0A1B0GX78 115 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 OR2W5A6NFC9 320 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SAGE2PA6NJ88 616 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SLC2A10O95528 541 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 DDAH2O95865 285 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 TSPAN19P0C672 248 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SAGP10523 405 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 EGR1P18146 543 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 PSMB10P40306 273 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 BDH1Q02338 343 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 LYSMD4Q5XG99 296 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 KCTD20Q7Z5Y7 419 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 TMEM200AQ86VY9 491 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 WDR5BQ86VZ2 330 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 OR14A16Q8NHC5 309 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 ZNF721Q8TF20 911 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 UFD1Q92890 307 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 ZNF501Q96CX3 271 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 MED18Q9BUE0 208 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 MKKSQ9NPJ1 570 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 PNO1Q9NRX1 252 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SF3B6Q9Y3B4 125 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 SPIN1Q9Y657 262 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3D-201ENST00000216099 ASXL3Q9C0F0 2248 aa9.65□□□□□ -0.87
APOBEC3D-201ENST00000216099 A0A087WUJ7 227 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 ISPDA4D126 451 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 NDUFA2O43678 99 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 IL1AP01583 271 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 ANKRD34CP0C6C1 535 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 FOLR1P15328 257 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 GABRA5P31644 462 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 OR1D4P47884 311 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 SLC6A9P48067 706 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 PSPHP78330 225 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 FHL1Q13642 323 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 LIPKQ5VXJ0 399 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 CD200R1LQ6Q8B3 271 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 THSD4Q6ZMP0 1018 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 RTL4Q6ZR62 310 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 BBS1Q8NFJ9 593 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 OR4C3Q8NH37 302 aa9.64□□□□□ -0.87
APOBEC3D-201ENST00000216099 SLC2A12Q8TD20 617 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms