RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 MAP4K2Q12851 820 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SELPLGQ14242 412 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 EBLN2Q6P2I7 272 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 OR56B4Q8NH76 319 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 DLL4Q9NR61 685 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 LOC102723996A0A087X1L8 192 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 DXOO77932 396 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 RBP4P02753 201 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 VDAC1P21796 283 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 KIR3DL2P43630 455 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GUCA2BQ16661 112 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 DEFB110Q30KQ9 67 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 RAB6CQ53S08 254 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ROBO4Q8WZ75 1007 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 INPP4AQ96PE3 977 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 NUDT16L1Q9BRJ7 211 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 TMEM147Q9BVK8 224 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SMOC2Q9H3U7 446 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 MYBPHLA2RUH7 354 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 NIPSNAP2O75323 286 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GYPCP04921 128 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 CSNK1EP49674 416 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 RACK1P63244 317 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 Q6ZN92 141 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 OR51A4Q8NGJ6 313 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 MRPL38Q96DV4 380 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 POM121L2Q96KW2 1035 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 F8W036 122 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 RAD1O60671 282 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 NPPAP01160 153 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 IL1RNP18510 177 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ACKR3P25106 362 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 TIA1P31483 386 aaKnown RBP eCLIP3.2□□□□□ -1.9
NEB-201ENST00000172853 LHX8Q68G74 356 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SYT8Q8NBV8 401 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SECTM1Q8WVN6 248 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 LRRC42Q9Y546 428 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ADAMTS13Q76LX8 1427 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ZNF705GA8MUZ8 300 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 DENRO43583 198 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 DOK2O60496 412 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 YBX1P67809 324 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 CDK5Q00535 292 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GTDC1Q4AE62 458 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 YIF1BQ5BJH7 314 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 NCCRP1Q6ZVX7 275 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 BAGE3Q86Y29 109 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 BAGE2Q86Y30 109 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GPR148Q8TDV2 347 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 TXLNGYQ9BZA5 131 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SDCBP2Q9H190 292 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 AGLP35573 1532 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 PPP1R3DO95685 299 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SLC10A3P09131 477 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 KCNQ1P51787 676 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SEMA3BQ13214 749 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GLYR1Q49A26 553 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 APOBEC3HQ6NTF7 200 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 Q6ZVL8 140 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 VRK2Q86Y07 508 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SCRN2Q96FV2 425 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 NUMBLQ9Y6R0 609 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 MROH1Q8NDA8 1641 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 CDK5RAP2Q96SN8 1893 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ATXN1LP0C7T5 689 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 SLC25A6P12236 298 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GAB1Q13480 694 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 DRAXINQ8NBI3 349 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 NETO1Q8TDF5 533 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ZNF418Q8TF45 676 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 EDARADDQ8WWZ3 215 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 ASB17Q8WXJ9 295 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 RND1Q92730 232 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SLC30A3Q99726 388 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 OARD1Q9Y530 152 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 PRSS38A1L453 326 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 BHLHE40O14503 412 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 LDB3O75112 727 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 RDH16O75452 317 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 LYPLA2O95372 231 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 TAS2R19P59542 299 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 MFGE8Q08431 387 aaPredicted RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 TMEM119Q4V9L6 283 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 LAMTOR1Q6IAA8 161 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 FAM71AQ8IYT1 594 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 C19orf47Q8N9M1 422 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 SLC41A2Q96JW4 573 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 MRGPRX2Q96LB1 330 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 LIN28AQ9H9Z2 209 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 POPDC3Q9HBV1 291 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SIX2Q9NPC8 291 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 MRPL15Q9P015 296 aaKnown RBP3.2□□□□□ -1.9
NEB-201ENST00000172853 TRAV6A0A075B6T7 132 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 NPIPB6E9PJ23 425 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SCG5P05408 212 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 NUDT7P0C024 238 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 FUT1P19526 365 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 GRPRP30550 384 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 SGSHP51688 502 aa3.2□□□□□ -1.9
NEB-201ENST00000172853 CACNG7P62955 275 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms