RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZNF701Q9NV72 531 aaPredicted RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 C19orf53Q9UNZ5 99 aaPredicted RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 SYT5O00445 386 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 CYB5AP00167 134 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 ATF4P18848 351 aaPredicted RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 POU3F4P49335 361 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 SIRPAP78324 504 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 KIRREL2Q6UWL6 708 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 THSD4Q6ZMP0 1018 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 LRRC69Q6ZNQ3 347 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 KANSL1Q7Z3B3 1105 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 PM20D2Q8IYS1 436 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 OR5J2Q8NH18 312 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 DVL3Q92997 716 aaPredicted RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF566Q969W8 418 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 RBM24Q9BX46 236 aaKnown RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 MED11Q9P086 117 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 TESQ9UGI8 421 aaKnown RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 VSTM2BA6NLU5 285 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 DSCR3O14972 297 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 GPANK1O95872 356 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 AMY2AP04746 511 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 MAPK3P27361 379 aaPredicted RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 UQCRC1P31930 480 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 S100A10P60903 97 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 DCDP81605 110 aaKnown RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 DEFA5Q01523 94 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 SERTAD2Q14140 314 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 BEX5Q5H9J7 111 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 DNM1P34Q6PK57 102 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 MCEMP1Q8IX19 187 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 TOR1AIP2Q8NFQ8 470 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 CADM4Q8NFZ8 388 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 GPR119Q8TDV5 335 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 TMEM234Q8WY98 164 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 INTS14Q96SY0 518 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 PLCXD1Q9NUJ7 323 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 DTX4Q9Y2E6 619 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 A0A1B0GX78 115 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 EEF1E1-BLOC1S5C9J1V9 151 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 PRICKLE3O43900 615 aaPredicted RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF432O94892 652 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 UTS2O95399 124 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 ECDO95905 644 aaPredicted RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 SLC35E2P0CK97 266 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 AKR1C4P17516 323 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 EPHA8P29322 1005 aaPredicted RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 SIGLEC14Q08ET2 396 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 PLPP7Q8NBV4 271 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 EDEM2Q9BV94 578 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 OR2B2Q9GZK3 357 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 RPS15P62841 145 aaKnown RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 UBE2IP63279 158 aaKnown RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 FCN2Q15485 313 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 KIF26BQ2KJY2 2108 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 PYHIN1Q6K0P9 492 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 CORO6Q6QEF8 472 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 CFAP77Q6ZQR2 320 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
CHPF2-201ENST00000035307 PTGES2Q9H7Z7 377 aa11.03□□□□□ -0.64
CHPF2-201ENST00000035307 METTL21EPA6NDL7 271 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 ALDOBP05062 364 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 UGT2B10P36537 528 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 FRKP42685 505 aaPredicted RBP11.02□□□□□ -0.64
CHPF2-201ENST00000035307 GNG2P59768 71 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 PLGLB1Q02325 96 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 CAMK2DQ13557 499 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 POU4F3Q15319 338 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 GLT8D1Q68CQ7 371 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 THOC7Q6I9Y2 204 aaKnown RBP11.02□□□□□ -0.64
CHPF2-201ENST00000035307 APOOLQ6UXV4 268 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF595Q8IYB9 648 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 ACBD4Q8NC06 268 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 ELMOD3Q96FG2 381 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 SEMA4CQ9C0C4 833 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 AICDAQ9GZX7 198 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 METTL8Q9H825 291 aaKnown RBP11.02□□□□□ -0.64
CHPF2-201ENST00000035307 DKKL1Q9UK85 242 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 MED13LQ71F56 2210 aa11.02□□□□□ -0.64
CHPF2-201ENST00000035307 MTCL1Q9Y4B5 1905 aaKnown RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 A0A1B0GTH9 108 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 PRAMEF25A6NGN4 478 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SHISA7A6NL88 538 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 PCBP3P57721 371 aaKnown RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 PCBP4P57723 403 aaKnown RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 PRPS1P60891 318 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 ZXDAP98168 799 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 NDUFAF7Q7L592 441 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 OR51D1Q8NGF3 324 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SLC2A12Q8TD20 617 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SPACA5Q96QH8 159 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 OR51B6Q9H340 312 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms