RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MTNR1BP49286 362 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 BLVRAP53004 296 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 CHAF1BQ13112 559 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SSPNQ14714 243 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SLC6A19Q695T7 634 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 OR6V1Q8N148 313 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 RFLNBQ8N5W9 214 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PARP16Q8N5Y8 322 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 TEX19Q8NA77 164 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SYT14Q8NB59 555 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 NEIL3Q8TAT5 605 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SMAP2Q8WU79 429 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 CT55Q8WUE5 264 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 THAP4Q8WY91 577 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 NPAS1Q99742 590 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 KCNS3Q9BQ31 491 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 EDEM2Q9BV94 578 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ANGPTL4Q9BY76 406 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SERINC1Q9NRX5 453 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PISDQ9UG56 409 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 COPS3Q9UNS2 423 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PCNX3Q9H6A9 2034 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 A0A087WZY1 265 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ISPDA4D126 451 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 PRSS37A4D1T9 235 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 C9orf172C9J069 976 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 FAM47E-STBD1D6RA91 191 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 LOC110117498-PIK3R3F6TDL0 507 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 DCTN6O00399 190 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 SERPINI2O75830 405 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 MT-CO3P00414 261 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 HPP00738 406 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 CLEC2LP0C7M8 214 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 CFL1P23528 166 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 TGM4P49221 684 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 SSR4P51571 173 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 HCCSP53701 268 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 SIRPAP78324 504 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 IFITM3Q01628 133 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 MRPL28Q13084 256 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 HNRNPA0Q13151 305 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 CDK5R1Q15078 307 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 SPANXN2Q5MJ10 180 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 FAM205BPQ63HN1 556 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 RPL22L1Q6P5R6 122 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ARL9Q6T311 187 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 H1FNTQ75WM6 255 aaPredicted RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 PXKQ7Z7A4 578 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 RPS19BP1Q86WX3 136 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 GHDCQ8N2G8 530 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 WDSUB1Q8N9V3 476 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ADPRHL1Q8NDY3 354 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 PAQR8Q8TEZ7 354 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 SNX33Q8WV41 574 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ASB15Q8WXK1 588 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 NXPE2Q96DL1 559 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 TSSK2Q96PF2 358 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 MROQ9BYG7 248 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 PTGES2Q9H7Z7 377 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF160Q9HCG1 818 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 ALKBH4Q9NXW9 302 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 FARSAQ9Y285 508 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 B3GALT5Q9Y2C3 310 aa12.9□□□□□ -0.34
RTFDC1-201ENST00000023939 A0A1W2PRG6 482 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 A6NIZ1 184 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 LIPT2A6NK58 231 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 C11orf98E9PRG8 122 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 MS4A18H0YCH9 400 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ARHGEF9O43307 516 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 EFNA2O43921 213 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 UPK1BO75841 260 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 TCN2P20062 427 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 TNFSF8P32971 234 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ACVR1BP36896 505 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 RAP1BP61224 184 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 RAP1AP62834 184 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 MXD1Q05195 221 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 PUDPQ08623 228 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 MS4A18Q3C1V0 323 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 H3F3CQ6NXT2 135 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 DCDC5Q6ZRR9 648 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 CDC20BQ86Y33 519 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 MINDY2Q8NBR6 621 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ZNF248Q8NDW4 579 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ABHD4Q8TB40 342 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ZBTB8AQ96BR9 441 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 SMIM19Q96E16 107 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 ARL5BQ96KC2 179 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC30A2Q9BRI3 323 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 SYT4Q9H2B2 425 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 RERGLQ9H628 205 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms