RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Acsm1Q91VA0 573 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tnk1Q99ML2 666 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 BlvraQ9CY64 295 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Dusp12Q9D0T2 339 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Clvs1Q9D4C9 354 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Paqr4Q9JJE4 273 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Itpr1P11881 2749 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Pdia2D3Z6P0 527 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Igk-V19-17P01633 149 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Zdhhc2P59267 366 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 VegfdP97946 358 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Plpp1Q61469 283 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Slc35f1Q8BGK5 408 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Mal2Q8BI08 175 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 FRRS1Q8K385 592 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 NansQ99J77 359 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rsl24d1Q99L28 163 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 S100a14Q9D2Q8 104 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Riox1Q9JJF3 603 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Aqp9Q9JJJ3 295 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 A630023A22RikJ3QP60 199 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r120K7N6J6 305 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Emp3O35912 163 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Clk1P22518 483 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rps4xP62702 263 aaKnown RBP19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Shisa6Q3UH99 525 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 D13Ertd608eQ3UPR8 151 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Irgm1Q60766 409 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Slc35a1Q61420 336 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 ShhQ62226 437 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Epha6Q62413 1035 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Adprhl1Q8BGK2 353 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Galnt12Q8BGT9 576 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 BivmQ8CBX9 502 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Cpne5Q8JZW4 593 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r17Q8R2D8 303 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr1079Q8VF52 315 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr862Q8VFJ1 306 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Spryd4Q91WK1 207 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Mrgpra1Q91WW5 304 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Abhd3Q91ZH7 411 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Glipr2Q9CYL5 154 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Ptp4a3Q9D658 173 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Aldh9a1Q9JLJ2 494 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Nkain4Q9JMG4 208 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Gm17190V9GX38 357 aa19.2■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Mfsd13bA0A1L1SUA2 455 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Cd209fD3Z1H5 274 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Btbd16E9Q173 522 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Pgbd1E9Q492 415 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Prps1l3G3UXL2 318 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 AdaP03958 352 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rps5P97461 204 aaKnown RBP19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 RalyQ64012 312 aaKnown RBP19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rcor3Q6PGA0 451 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Eid2Q6X7S9 236 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Enkd1Q7TSV9 346 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Nudt9Q8BVU5 350 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Emc1Q8C7X2 997 aaKnown RBP19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Teddm1bQ8CC62 306 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Smco1Q8CEZ1 214 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Hpf1Q8CFE2 346 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Neurl3Q8CJC5 254 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr791Q8VGJ0 312 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Sec16bQ91XT4 1051 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Serpinb11Q9CQV3 388 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Prps1Q9D7G0 318 aa19.19■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Gm4177D3YTX5 305 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn2r16E9Q025 850 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r127K7N6J5 305 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r142K7N6U0 305 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Gm17019K7N6W5 255 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r94K7N6X3 305 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r115K7N6Y3 295 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Vmn1r159K7N701 305 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Anxa3O35639 323 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 FiglaO55208 194 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Il9P15247 144 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Acod1P54987 488 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Fgf11P70378 225 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Fbxo31Q3TQF0 507 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Alg11Q3TZM9 492 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Ctsll3Q3ULP7 331 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Gpr107Q8BUV8 551 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rad51ap1Q8C551 337 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 GabrpQ8QZW7 440 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 BanpQ8VBU8 548 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr998Q8VF76 314 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr214Q8VG27 320 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Slc27a4Q91VE0 643 aaKnown RBP19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Bhlhe41Q99PV5 410 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Timm50Q9D880 353 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Phf7Q9DAG9 307 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Isyna1Q9JHU9 557 aa19.18■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr723E9PZU2 309 aa19.17■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr294F7CWV4 335 aa19.17■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr724K7N5X7 309 aa19.17■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Gna13P27601 377 aa19.17■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Slc35f3Q1LZI2 421 aa19.17■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr151Q60893 309 aa19.17■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms