RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 AccslQ3UX83 580 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f27Q5FWA1 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 CybaQ61462 192 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Eci3Q78JN3 317 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 GskipQ8BGR8 139 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Nyap2Q8BM65 682 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Adamts4Q8BNJ2 833 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tctn1Q8BZ64 593 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr283Q8VGU2 309 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr622Q8VGY7 317 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Abhd3Q91ZH7 411 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 GMCL1P1Q99N64 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ift27Q9D0P8 186 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Phf7Q9DAG9 307 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mettl15Q9DCL4 406 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 PpieQ9QZH3 301 aaKnown RBP7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Npas3Q9QZQ0 925 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Adam11Q9R1V4 773 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc37a4A0A1L1SUI3 450 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1366A0A1W2P740 328 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cd300cA2A7V7 229 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr294F7CWV4 335 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn2r36K7N741 852 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fcer1aP20489 250 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfp36P22893 319 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cd40P27512 289 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gabarapl2P60521 117 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tuba1cP68373 449 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 FapP97321 761 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm45902Q3UDN3 361 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pate2Q3UW31 111 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 N6amt1Q6SKR2 214 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr297Q7TS07 310 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1079Q8VF52 315 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Sp7Q8VI67 428 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 NwcQ9CQI4 244 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Smim23Q9DAL0 136 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Chrm3Q9ERZ3 589 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Nrip3Q9JJR9 240 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tuba8Q9JJZ2 449 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tpk1Q9R0M5 243 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Klf5Q9Z0Z7 446 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc7a5Q9Z127 512 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Celsr1O35161 3034 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr239A0PK55 315 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfp534A2A7A1 661 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2abC0HKE1 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2acC0HKE2 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2adC0HKE3 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2aeC0HKE4 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2agC0HKE5 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2aiC0HKE6 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2anC0HKE7 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2aoC0HKE8 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2apC0HKE9 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ces2gE9PV38 560 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr521E9Q519 321 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr55K7N6Q1 315 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rnf13O54965 381 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Emc8O70378 207 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 MscO88940 201 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 P01822 137 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cbx3P23198 183 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pcmt1P23506 227 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mmp12P34960 473 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ext1P97464 746 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfp39Q02525 718 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Plpp5Q3UMZ3 260 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Surf4Q64310 269 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zrsr1Q64707 428 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Arhgef39Q66JY6 344 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Znf182Q6P560 627 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Opn5Q6VZZ7 377 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Il17fQ7TNI7 161 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist3h2aQ8BFU2 130 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Poldip3Q8BG81 420 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mettl27Q8BGM4 238 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tm9sf4Q8BH24 643 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2afQ8CGP5 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2ahQ8CGP6 128 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hist1h2akQ8CGP7 130 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fbxo45Q8K3B1 286 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mcfd2Q8K5B2 145 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ahsa2Q8N9S3 331 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 H2afjQ8R1M2 129 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rfc3Q8R323 356 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tspan10Q8VCF5 331 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1393Q8VFA7 311 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr686Q8VGX3 317 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Asb16Q8VHS5 453 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Basp1Q91XV3 226 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Far1Q922J9 515 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ier3ip1Q9CR20 82 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Upk3bl1Q9D701 249 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Entpd4Q9DBT4 613 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rtp4Q9ER80 249 aaKnown RBP7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Wif1Q9WUA1 379 aa7.9□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ms4a7E9Q9V5 267 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zbtb25G3UW50 439 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mettl7a3G3X9G9 244 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms