RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 LRRC3CA6NJW4 275 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 FAM183AA6NL82 134 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 PRR23D1E9PI22 279 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 H3BML4 177 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 M0R082 166 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 IMPA2O14732 288 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ARPC3O15145 178 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 IDH3BO43837 385 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ZIC3O60481 467 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 PRR23D2P0DMB1 279 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 IMPDH2P12268 514 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF3P17036 446 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ACVR2AP27037 513 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 C21orf33P30042 268 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 SRD5A2P31213 254 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 CDH11P55287 796 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 GPR85P60893 370 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 MVKQ03426 396 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 MFAP5Q13361 173 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 CRMP1Q14194 572 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 MFSD13AQ14CX5 517 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 OR7A5Q15622 319 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 SGCBQ16585 318 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 CRTC2Q53ET0 693 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 KLHL22Q53GT1 634 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 C3orf33Q6P1S2 294 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 GPR141Q7Z602 305 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 GID4Q8IVV7 300 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 FAM98AQ8NCA5 519 aaKnown RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 SLC37A3Q8NCC5 494 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 OR52E2Q8NGJ4 325 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 OR4K13Q8NH42 304 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF417Q8TAU3 575 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 FAR1Q8WVX9 515 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 MUL1Q969V5 352 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 TMEM80Q96HE8 168 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ARL5BQ96KC2 179 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF587Q96SQ5 575 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 TMEM185BQ9H7F4 350 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 MED20Q9H944 212 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 MRPL39Q9NYK5 338 aaKnown RBP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 TAS2R5Q9NYW4 299 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 SEC14L4Q9UDX3 406 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.79□□□□□ -0.52
PHGDH-221ENST00000641573 PCNX3Q9H6A9 2034 aa11.79□□□□□ -0.52
PHGDH-221ENST00000641573 DOPEY1Q5JWR5 2465 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 IRGMA1A4Y4 181 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 OR5H15A6NDH6 313 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 LIPT2A6NK58 231 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF99A8MXY4 864 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 M0R3G1 203 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 PLPP3O14495 311 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 OR6A2O95222 327 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 TXNDC12O95881 172 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 OPN1LWP04000 364 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 F13BP05160 661 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ADRA2AP08913 450 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ADORA3P0DMS8 318 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 APEHP13798 732 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 HIST1H1CP16403 213 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF17P17021 662 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 PAICSP22234 425 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 FKBP2P26885 142 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 GTF2E2P29084 291 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 HTR1FP30939 366 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 CLK1P49759 484 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 CCL11P51671 97 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 IRF3Q14653 427 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 RAB39AQ14964 217 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 GLYR1Q49A26 553 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 RAET1LQ5VY80 246 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 NIPAL3Q6P499 406 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 MEPCEQ7L2J0 689 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 SCAIQ8N9R8 606 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 CYB561A3Q8NBI2 242 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 SDR9C7Q8NEX9 313 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 OR2M7Q8NG81 312 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 SLC25A43Q8WUT9 341 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 RORBQ92753 470 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 PTP4A1Q93096 173 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 MIB2Q96AX9 1013 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 RASD2Q96D21 266 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 LGALS12Q96DT0 336 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 Q96M85 177 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 FAM173AQ9BQD7 235 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 TUBA1CQ9BQE3 449 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 HCAR1Q9BXC0 346 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 HES7Q9BYE0 225 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ZFP64Q9NPA5 681 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ACOT13Q9NPJ3 140 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 INIPQ9NRY2 104 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 MRPS18AQ9NVS2 196 aaKnown RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 ALKBH4Q9NXW9 302 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 BOKQ9UMX3 212 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-221ENST00000641573 CORINQ9Y5Q5 1042 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 COMMD3-BMI1R4GMX3 469 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms