RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ZNF2Q9BSG1 426 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-216ENST00000640058 NAT9Q9BTE0 207 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 RAB34Q9BZG1 259 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 VCX2Q9H322 139 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 CDC42EP4Q9H3Q1 356 aaKnown RBP2.44□□□□□ -2.02
CCDC7-216ENST00000640058 YY1AP1Q9H869 796 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 OPN4Q9UHM6 478 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 PTBP2Q9UKA9 531 aaKnown RBP2.44□□□□□ -2.02
CCDC7-216ENST00000640058 SH3TC1Q8TE82 1336 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 IGKV1D-8A0A087WSZ0 117 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 A0A1B0GUS0 222 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 DCTN6O00399 190 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 B4GALT2O60909 372 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 SS18L1O75177 396 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-216ENST00000640058 SURF6O75683 361 aaKnown RBP2.43□□□□□ -2.02
CCDC7-216ENST00000640058 IGHDP01880 384 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 GCAP28676 217 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 ASPHQ12797 758 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 C5orf47Q569G3 176 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 CARD16Q5EG05 197 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 XKR4Q5GH76 650 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 OR2G6Q5TZ20 316 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 KDELC1Q6UW63 502 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 TMIGD1Q6UXZ0 262 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 CCDC50Q8IVM0 306 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 ATP6V0D2Q8N8Y2 350 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 OR6C4Q8NGE1 309 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 ST8SIA1Q92185 356 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 FRZBQ92765 325 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF641Q96N77 438 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-216ENST00000640058 SLC38A2Q96QD8 506 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 NPY6RQ99463 290 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 SPIN2AQ99865 258 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 SPIN2BQ9BPZ2 258 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 GPR61Q9BZJ8 451 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 SELENOIQ9C0D9 397 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 ROGDIQ9GZN7 287 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 C20orf85Q9H1P6 137 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 LRRC40Q9H9A6 602 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 ADAM28Q9UKQ2 775 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 CDH9Q9ULB4 789 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 TRAF3IP3Q9Y228 551 aa2.43□□□□□ -2.02
CCDC7-216ENST00000640058 CLSPNQ9HAW4 1339 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 SNTNA6NMZ2 147 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 COLCA2A8K830 154 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF208O43345 1280 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 FCMRO60667 390 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 DIRAS1O95057 198 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 STAMBPO95630 424 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 TSPAN12O95859 305 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 IL1BP01584 269 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 OPN1MWP04001 364 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 HSMCR30P0CW71 290 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 OPN1MW2P0DN77 364 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 OPN1MW3P0DN78 364 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 CALCRP30988 508 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 DDOSTP39656 456 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 RPL13AP40429 203 aaKnown RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 OPRD1P41143 372 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 VDAC2P45880 294 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 CEBPDP49716 269 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 KPNA2P52292 529 aaKnown RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 FGL1Q08830 312 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 NCBP1Q09161 790 aaKnown RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 CEP55Q53EZ4 464 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 LY6G6FQ5SQ64 297 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 PDZK1Q5T2W1 519 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 Q5W150 140 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 RDH10Q8IZV5 341 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 EIF1ADQ8N9N8 165 aaKnown RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 OR8J1Q8NGP2 316 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 UBE2E3Q969T4 207 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 SEC22AQ96IW7 307 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 CCT7Q99832 543 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 RIOK1Q9BRS2 568 aaKnown RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 IFI27L2Q9H2X8 130 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 SUDS3Q9H7L9 328 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-216ENST00000640058 MCCC2Q9HCC0 563 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 CLEC4AQ9UMR7 237 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 ASB3Q9Y575 518 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 MROH7-TTC4A0A0A0MT08 1334 aa2.42□□□□□ -2.02
CCDC7-216ENST00000640058 RPAP1Q9BWH6 1393 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 A0A0G2JN53 185 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 IQANK1A0A1B0GTG1 560 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 A0A1W2PPE3 182 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 ANGPTL7O43827 346 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 CLDN9O95484 217 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 RHOXF2BP0C7M4 288 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 CXCR2P25025 360 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 RFC4P35249 363 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 MAGEA8P43361 318 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 KIR2DS4P43632 304 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 AIF1P55008 147 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 KLHL38Q2WGJ6 581 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 BOLA3Q53S33 107 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 PMF1Q6P1K2 205 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 EFL1Q7Z2Z2 1120 aaKnown RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF571Q7Z3V5 609 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms