RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ADORA3P0DMS8 318 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 FPR3P25089 353 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 OPRM1P35372 400 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 GSSP48637 474 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 RPS4XP62701 263 aaKnown RBP14.22□□□□□ -0.13
CLN6-216ENST00000636876 IL1RL1Q01638 556 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 FHL1Q13642 323 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 ANKDD1AQ495B1 522 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 TMEM201Q5SNT2 666 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 VWA1Q6PCB0 445 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 SHQ1Q6PI26 577 aaKnown RBP14.22□□□□□ -0.13
CLN6-216ENST00000636876 CLEC18BQ6UXF7 455 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 ZIC4Q8N9L1 334 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 CLEC18CQ8NCF0 446 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 OR10G2Q8NGC3 310 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 OR6K3Q8NGY3 331 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 ITLN2Q8WWU7 325 aaPredicted RBP14.22□□□□□ -0.13
CLN6-216ENST00000636876 ZNF775Q96BV0 537 aaPredicted RBP14.22□□□□□ -0.13
CLN6-216ENST00000636876 NRBF2Q96F24 287 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 CENPNQ96H22 339 aaPredicted RBP14.22□□□□□ -0.13
CLN6-216ENST00000636876 FANCFQ9NPI8 374 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 HIF3AQ9Y2N7 669 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 NOX1Q9Y5S8 564 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 TRAV27A0A087WT01 109 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 UNC119BA6NIH7 251 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 C11orf98E9PRG8 122 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 DVL2O14641 736 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 TRAF3IP2O43734 574 aaPredicted RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 ZNF43P17038 809 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 AGAP20933 346 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 AHCYP23526 432 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 AQP2P41181 271 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 RPL18Q07020 188 aaKnown RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 TSPAN31Q12999 210 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 C1DQ13901 141 aaKnown RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 ZBED5Q49AG3 693 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 NHLRC1Q6VVB1 395 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 CREB3L2Q70SY1 520 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 NUFIP2Q7Z417 695 aaKnown RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 BTLAQ7Z6A9 289 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 PXKQ7Z7A4 578 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 GALNT5Q7Z7M9 940 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 MRGPRGQ86SM5 289 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 EPHX4Q8IUS5 362 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 LIX1LQ8IVB5 337 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 UEVLDQ8IX04 471 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 HS3ST5Q8IZT8 346 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 ZNF808Q8N4W9 903 aaPredicted RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 AQP11Q8NBQ7 271 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 OR51A7Q8NH64 312 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 OR5K1Q8NHB7 308 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 MOSPD2Q8NHP6 518 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 STARD4Q96DR4 205 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 TNFRSF13CQ96RJ3 184 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 PKP2Q99959 881 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 DGCR6LQ9BY27 220 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 MCCC2Q9HCC0 563 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 PDP1Q9P0J1 537 aaPredicted RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 MGAT4BQ9UQ53 548 aa14.21□□□□□ -0.13
CLN6-216ENST00000636876 NOSIPQ9Y314 301 aaKnown RBP14.21□□□□□ -0.13
CLN6-216ENST00000636876 ALPK2Q86TB3 2170 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 WIPF3A6NGB9 483 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 RNF13O43567 381 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 PTP4A3O75365 173 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 GASTP01350 101 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 HLA-DOBP13765 273 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 BMP5P22003 454 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 ARHGDIAP52565 204 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 ELF3P78545 371 aaPredicted RBP14.2□□□□□ -0.14
CLN6-216ENST00000636876 POU3F1Q03052 451 aaPredicted RBP14.2□□□□□ -0.14
CLN6-216ENST00000636876 XKRXQ6PP77 449 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 FAM26EQ8N5C1 309 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 RELL2Q8NC24 303 aaPredicted RBP14.2□□□□□ -0.14
CLN6-216ENST00000636876 ANKK1Q8NFD2 765 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 LILRB4Q8NHJ6 448 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 TMEM45BQ96B21 275 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 ZNF385AQ96PM9 386 aaKnown RBP14.2□□□□□ -0.14
CLN6-216ENST00000636876 FEVQ99581 238 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 SEMA6AQ9H2E6 1030 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 PIGMQ9H3S5 423 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 SIGLEC7Q9Y286 467 aa14.2□□□□□ -0.14
CLN6-216ENST00000636876 ADAP00813 363 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 CGAP01215 116 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 CD8BP10966 210 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 POU2F1P14859 743 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 ZNF23P17027 643 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 ZNF26P17031 533 aaPredicted RBP14.19□□□□□ -0.14
CLN6-216ENST00000636876 PRKACGP22612 351 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 NTF4P34130 210 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 PRPS1P60891 318 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 SLC25A35Q3KQZ1 300 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 ALG10Q5BKT4 473 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 CASP12Q6UXS9 341 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 HIPK1Q86Z02 1210 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 PQLC1Q8N2U9 271 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 SVOPLQ8N434 492 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 GTPBP3Q969Y2 492 aaKnown RBP14.19□□□□□ -0.14
CLN6-216ENST00000636876 C12orf49Q9H741 205 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 PLSCR4Q9NRQ2 329 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 INIPQ9NRY2 104 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms