RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 TUBA1BP68363 451 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 TUBA4AP68366 448 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 CHRNB3Q05901 458 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 METTL21CQ5VZV1 264 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 TUBA1AQ71U36 451 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 SLC30A8Q8IWU4 369 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 UEVLDQ8IX04 471 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 PIK3C3Q8NEB9 887 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 OR6S1Q8NH40 331 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 SLC26A7Q8TE54 656 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 HTRA1Q92743 480 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 BCL2L2Q92843 193 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 MCHR1Q99705 422 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 WFDC6Q9BQY6 131 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 KAT8Q9H7Z6 458 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 MOV10Q9HCE1 1003 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-230ENST00000636768 ARPC4-TTLL3A0A0A6YYG9 625 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 IGHV1-18A0A0C4DH31 117 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 CPSF4LA6NMK7 179 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 M0QX08 132 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 TRAF3IP2O43734 574 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 FMO6PO60774 539 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 ZNF432O94892 652 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 CRYAAP02489 173 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 BGLAPP02818 100 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 C8BP07358 591 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 TROVE2P10155 538 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 PCGF2P35227 344 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 POU3F1Q03052 451 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 PMS2P3Q13401 168 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 DUSP7Q16829 419 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 CEACAM16Q2WEN9 425 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 INTS11Q5TA45 600 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 CARD17Q5XLA6 110 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 ZNF613Q6PF04 617 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 CLEC2AQ6UVW9 174 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 SCAIQ8N9R8 606 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 OR10A6Q8NH74 314 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 VANGL1Q8TAA9 524 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 OR2M2Q96R28 347 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 ARHGDIGQ99819 225 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 TMEM43Q9BTV4 400 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 CRLF2Q9HC73 371 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 GPR35Q9HC97 309 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
CACNA1A-230ENST00000636768 LOC102725191A0A1B0GVB3 256 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 RPL36A-HNRNPH2H7BZ11 118 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 H7C417 338 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 M0R3G1 203 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 CHP2O43745 196 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 SERPINI2O75830 405 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 HPRP00739 348 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 CAPZA2P47755 286 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 DSCR9P59020 149 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 PUDPQ08623 228 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 CYLC2Q14093 348 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 TRMT5Q32P41 509 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 TMEM123Q8N131 208 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 GPR32P1Q8NGA4 272 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 OR6T1Q8NGN1 323 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 FBXO17Q96EF6 278 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 SLC41A3Q96GZ6 507 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 MOGAT1Q96PD6 335 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 KATNB1Q9BVA0 655 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 NELFAQ9H3P2 528 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 MRGBPQ9NV56 204 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 MRPL39Q9NYK5 338 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 NOX1Q9Y5S8 564 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 CSPG4Q6UVK1 2322 aa13.08□□□□□ -0.32
CACNA1A-230ENST00000636768 ABCA2Q9BZC7 2435 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 MS4A18H0YCH9 400 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 FBP2O00757 339 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 SEC14L2O76054 403 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 MT-ATP6P00846 226 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 VIMP08670 466 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 CECR9P0C854 216 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 HLA-DOBP13765 273 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 AHCYP23526 432 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 NAAAQ02083 359 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 NPTX1Q15818 432 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 MS4A18Q3C1V0 323 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 MMEL1Q495T6 779 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 TAMM41Q96BW9 452 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 SH3GL1Q99961 368 aa13.07□□□□□ -0.32
CACNA1A-230ENST00000636768 EMC6Q9BV81 110 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms