RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MISP3Q96FF7 219 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 LRRC46Q96FV0 321 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TRIB1Q96RU8 372 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SLIRPQ9GZT3 109 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 AICDAQ9GZX7 198 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PELI2Q9HAT8 420 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF226Q9NYT6 803 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SPRR3Q9UBC9 169 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OSGIN1Q9UJX0 560 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TESMINQ9Y4I5 508 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 DSPPQ9NZW4 1301 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 A6NNC1 897 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 WASHC1A8K0Z3 465 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PLPP1O14494 284 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 DHHO43323 396 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 DYRK3O43781 588 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OR10H2O60403 315 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 LCKP06239 509 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CDK1P06493 297 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 KLK1P06870 262 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CNR1P21554 472 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CPN2P22792 545 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 LIM2P55344 173 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 HSD17B7P56937 341 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RAB38P57729 211 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 IL1RL1Q01638 556 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 HIST2H2ACQ16777 129 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 EXOC3L2Q2M3D2 409 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 HIST2H2AA3Q6FI13 130 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 AHSA2Q719I0 299 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ARMC8Q8IUR7 673 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 P3H2Q8IVL5 708 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OR5L2Q8NGL0 311 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OR6Q1Q8NGQ2 317 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NT5CQ8TCD5 201 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SPPL2AQ8TCT8 520 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PTPMT1Q8WUK0 201 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ABTB1Q969K4 478 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NEURL3Q96EH8 262 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SENP5Q96HI0 755 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 DGAT2Q96PD7 388 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 KCNC2Q96PR1 638 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PIP5K1AQ99755 562 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NIPSNAP1Q9BPW8 284 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MAPKAP1Q9BPZ7 522 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MS4A8Q9BY19 250 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MROQ9BYG7 248 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CXorf36Q9H7Y0 433 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ZDHHC11Q9H8X9 412 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 A4GALTQ9NPC4 353 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ACER3Q9NUN7 267 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 EHD3Q9NZN3 535 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 BOKQ9UMX3 212 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 WBP11Q9Y2W2 641 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ENPP4Q9Y6X5 453 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SPACA6W5XKT8 324 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 KIAA1549Q9HCM3 1950 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 A0A087WWL8 130 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 A0A1W2PRB8 838 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 WDR1O75083 606 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 KRT75O95678 551 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ITGA2P17301 1181 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DDCP20711 480 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 UQCRC2P22695 453 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 PSMB9P28065 219 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 BSGP35613 385 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 UGT2B10P36537 528 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 VBP1P61758 197 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 NCS1P62166 190 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SPIBQ01892 262 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OXA1LQ15070 435 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 MAPK11Q15759 364 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 RGS21Q2M5E4 152 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SLC25A35Q3KQZ1 300 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 C16orf87Q6PH81 154 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF595Q8IYB9 648 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 RELL2Q8NC24 303 aaPredicted RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR2L5Q8NG80 312 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 S100ZQ8WXG8 99 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SLC38A4Q969I6 547 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 C18orf12Q96KH6 178 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 GNRHR2Q96P88 292 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 COPS4Q9BT78 406 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 RSPO3Q9BXY4 272 aaPredicted RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ITPAQ9BY32 194 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 NT5DC2Q9H857 520 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 TRIM45Q9H8W5 580 aaPredicted RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 HMG20AQ9NP66 347 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SIRT3Q9NTG7 399 aaPredicted RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 LPAR3Q9UBY5 353 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DAPP1Q9UN19 280 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ERVK-19Q9WJR5 959 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ANGPT4Q9Y264 503 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ATG4BQ9Y4P1 393 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 FUOMA2VDF0 154 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR14I1A6ND48 311 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 A6NLC8 198 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 KIAA1324LA8MWY0 1029 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms